RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CHP1Q99653 195 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 CGRRF1Q99675 332 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 NLRC4Q9NPP4 1024 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 LCA5LO95447 670 aa16.47■□□□□ 0.23
SCLT1-209ENST00000511426 VTNP04004 478 aa16.47■□□□□ 0.23
SCLT1-209ENST00000511426 EDN1P05305 212 aa16.47■□□□□ 0.23
SCLT1-209ENST00000511426 FERP16591 822 aa16.47■□□□□ 0.23
SCLT1-209ENST00000511426 STAT1P42224 750 aa16.47■□□□□ 0.23
SCLT1-209ENST00000511426 BEX3Q00994 111 aa16.47■□□□□ 0.23
SCLT1-209ENST00000511426 TOGARAM2Q6ZUX3 1019 aa16.47■□□□□ 0.23
SCLT1-209ENST00000511426 WDR49Q8IV35 697 aa16.47■□□□□ 0.23
SCLT1-209ENST00000511426 C17orf53Q8N3J3 647 aaPredicted RBP16.47■□□□□ 0.23
SCLT1-209ENST00000511426 CCDC127Q96BQ5 260 aa16.47■□□□□ 0.23
SCLT1-209ENST00000511426 HAPLN2Q9GZV7 340 aa16.47■□□□□ 0.23
SCLT1-209ENST00000511426 ADAMTS10Q9H324 1103 aa16.47■□□□□ 0.23
SCLT1-209ENST00000511426 CPSF3Q9UKF6 684 aaKnown RBP16.47■□□□□ 0.23
SCLT1-209ENST00000511426 FHOD1Q9Y613 1164 aa16.47■□□□□ 0.23
SCLT1-209ENST00000511426 ATP8B3O60423 1300 aa16.47■□□□□ 0.23
SCLT1-209ENST00000511426 IL18RAPO95256 599 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 GJB1P08034 283 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 RAPGEF1Q13905 1077 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 SPA17Q15506 151 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 ASIC2Q16515 512 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 TMEM132AQ24JP5 1023 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 ZACNQ401N2 412 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 DNTTIP2Q5QJE6 756 aaKnown RBP16.46■□□□□ 0.23
SCLT1-209ENST00000511426 HGSNATQ68CP4 663 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 SV2AQ7L0J3 742 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 RPAINQ86UA6 219 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 REXO1L1PQ8IX06 675 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 ZSWIM2Q8NEG5 633 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 JAKMIP2Q96AA8 810 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 ZBTB45Q96K62 511 aaPredicted RBP16.46■□□□□ 0.23
SCLT1-209ENST00000511426 ADPGKQ9BRR6 497 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 DEF6Q9H4E7 631 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 RAB20Q9NX57 234 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 ARHGAP20Q9P2F6 1191 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 MYO1AQ9UBC5 1043 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 DDX20Q9UHI6 824 aaKnown RBP16.46■□□□□ 0.23
SCLT1-209ENST00000511426 USP27XA6NNY8 438 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 GPR32O75388 356 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 DLATP10515 647 aaKnown RBP16.46■□□□□ 0.23
SCLT1-209ENST00000511426 ACTN1P12814 892 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 ACOT2P49753 483 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 PTPN11Q06124 597 aaPredicted RBP16.46■□□□□ 0.23
SCLT1-209ENST00000511426 DCAF4L1Q3SXM0 396 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 IQCEQ6IPM2 695 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 RNF180Q86T96 592 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 RSPH3Q86UC2 560 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 VPS36Q86VN1 386 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 TSGA10Q9BZW7 698 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 CDT1Q9H211 546 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 HAUS4Q9H6D7 363 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 MINDY3Q9H8M7 445 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 TRMT1Q9NXH9 659 aaKnown RBP16.46■□□□□ 0.23
SCLT1-209ENST00000511426 GTF2IRD1Q9UHL9 959 aa16.46■□□□□ 0.23
SCLT1-209ENST00000511426 A0A1B0GUA9 196 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 F8VZ95 297 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 RBAK-RBAKDNI3L0D1 243 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 B4GALT4O60513 344 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 CLTAP09496 248 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 TNNT1P13805 278 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 TNNI1P19237 187 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 SOX5P35711 763 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 GCNT1Q02742 428 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 KLHL30Q0D2K2 578 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 MTF1Q14872 753 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 TDRD12Q587J7 1177 aaKnown RBP16.45■□□□□ 0.22
SCLT1-209ENST00000511426 C10orf76Q5T2E6 689 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 FAXDC2Q96IV6 333 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 C16orf45Q96MC5 204 aaPredicted RBP16.45■□□□□ 0.22
SCLT1-209ENST00000511426 NT5C1BQ96P26 610 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 HDAC6Q9UBN7 1215 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 DNAJC12Q9UKB3 198 aa16.45■□□□□ 0.22
SCLT1-209ENST00000511426 MOXD2PA6NHM9 499 aa16.44■□□□□ 0.22
SCLT1-209ENST00000511426 TSPAN1O60635 241 aa16.44■□□□□ 0.22
SCLT1-209ENST00000511426 C4BPAP04003 597 aaKnown RBP16.44■□□□□ 0.22
SCLT1-209ENST00000511426 DARSP14868 501 aaKnown RBP16.44■□□□□ 0.22
SCLT1-209ENST00000511426 EIF4BP23588 611 aaKnown RBP16.44■□□□□ 0.22
SCLT1-209ENST00000511426 KIF11P52732 1056 aa16.44■□□□□ 0.22
SCLT1-209ENST00000511426 CRYBB1P53674 252 aaPredicted RBP16.44■□□□□ 0.22
SCLT1-209ENST00000511426 MFAP3P55082 362 aa16.44■□□□□ 0.22
SCLT1-209ENST00000511426 MAP2K1Q02750 393 aaPredicted RBP16.44■□□□□ 0.22
SCLT1-209ENST00000511426 ASTE1Q2TB18 679 aaPredicted RBP16.44■□□□□ 0.22
SCLT1-209ENST00000511426 CCSAPQ6IQ19 270 aaPredicted RBP16.44■□□□□ 0.22
SCLT1-209ENST00000511426 NT5DC4Q86YG4 428 aa16.44■□□□□ 0.22
SCLT1-209ENST00000511426 CD302Q8IX05 232 aa16.44■□□□□ 0.22
SCLT1-209ENST00000511426 ZBTB10Q96DT7 871 aa16.44■□□□□ 0.22
SCLT1-209ENST00000511426 TSEN34Q9BSV6 310 aaKnown RBP16.44■□□□□ 0.22
SCLT1-209ENST00000511426 ASB7Q9H672 318 aa16.44■□□□□ 0.22
SCLT1-209ENST00000511426 PAXBP1Q9Y5B6 917 aa16.44■□□□□ 0.22
SCLT1-209ENST00000511426 SCN10AQ9Y5Y9 1956 aa16.44■□□□□ 0.22
SCLT1-209ENST00000511426 MYADML2A6NDP7 307 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 AKR1B10O60218 316 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 PGK1P00558 417 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 IQCF3P0C7M6 154 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 ELNP15502 786 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 ARF4P18085 180 aaPredicted RBP16.43■□□□□ 0.22
SCLT1-209ENST00000511426 CCND3P30281 292 aaPredicted RBP16.43■□□□□ 0.22
SCLT1-209ENST00000511426 ETF1P62495 437 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms