RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-208	ENST00000511001	DSG1	Q02413	1049 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	TUSC3	Q13454	348 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	ZRSR1	Q15695	479 aa	Known RBP	13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	TMEM132A	Q24JP5	1023 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	DCAF4L1	Q3SXM0	396 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	RARS2	Q5T160	578 aa	Known RBP	13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	ATF7IP2	Q5U623	682 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	FUT10	Q6P4F1	479 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	PHLPP2	Q6ZVD8	1323 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	BRAP	Q7Z569	592 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	CABP7	Q86V35	215 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	RPGRIP1	Q96KN7	1286 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	DRC1	Q96MC2	740 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	ACO2	Q99798	780 aa	Known RBP	13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	ADPGK	Q9BRR6	497 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	COLEC11	Q9BWP8	271 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	POMK	Q9H5K3	350 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	RXFP1	Q9HBX9	757 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	PTPRH	Q9HD43	1115 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	MRPL17	Q9NRX2	175 aa	Known RBP	13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	CHST7	Q9NS84	486 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	DZANK1	Q9NVP4	752 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	TNFSF13B	Q9Y275	285 aa		13.26	□□□□□ -0.29
CHFR-208	ENST00000511001	C2CD2L	O14523	706 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	ABLIM1	O14639	778 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	UROD	P06132	367 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	WEE2	P0C1S8	567 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	PLA2G4B	P0C869	781 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	GLUD2	P49448	558 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	MRE11	P49959	708 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	ITIH3	Q06033	890 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	DMP1	Q13316	513 aa	Predicted RBP	13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	SF3A1	Q15459	793 aa	Known RBP	13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	ARSH	Q5FYA8	562 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	KIAA1841	Q6NSI8	718 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	PPFIBP1	Q86W92	1011 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	KCTD17	Q8N5Z5	321 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	CEP120	Q8N960	986 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	FBXL18	Q96ME1	805 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	NTPCR	Q9BSD7	190 aa	Known RBP	13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	TIPIN	Q9BVW5	301 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	TARS2	Q9BW92	718 aa	Known RBP	13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	EMILIN2	Q9BXX0	1053 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	NT5C3A	Q9H0P0	336 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	CDT1	Q9H211	546 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	KMT5A	Q9NQR1	393 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	BLOC1S4	Q9NUP1	217 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	ADAM28	Q9UKQ2	775 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	GDA	Q9Y2T3	454 aa		13.25	□□□□□ -0.29
CHFR-208	ENST00000511001	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	VPS37C	A5D8V6	355 aa	Predicted RBP	13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	CASTOR2	A6NHX0	329 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	SLC16A4	O15374	487 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	TEX28	O15482	410 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	SLC26A4	O43511	780 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	NR1I2	O75469	434 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	TH	P07101	528 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	PROZ	P22891	400 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	KLRC2	P26717	231 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	MTHFR	P42898	656 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	RAD51AP2	Q09MP3	1159 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	REST	Q13127	1097 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	PTPA	Q15257	358 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	CES5A	Q6NT32	575 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	GPR65	Q8IYL9	337 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	TMEM87A	Q8NBN3	555 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	SPIRE2	Q8WWL2	714 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	B3GALT6	Q96L58	329 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	AK8	Q96MA6	479 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	NECTIN4	Q96NY8	510 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	MRPL4	Q9BYD3	311 aa	Known RBP	13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	C17orf75	Q9HAS0	396 aa		13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	DAXX	Q9UER7	740 aa	Predicted RBP	13.24	□□□□□ -0.29
CHFR-208	ENST00000511001	ANK1	P16157	1881 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	KIF4A	O95239	1232 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	BMP15	O95972	392 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	PLS3	P13797	630 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	SYT1	P21579	422 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	SP100	P23497	879 aa	Predicted RBP	13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	IGFBP6	P24592	240 aa	Predicted RBP	13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	GRM5	P41594	1212 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	CACNB1	Q02641	598 aa	Predicted RBP	13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	XKR4	Q5GH76	650 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	CD300LG	Q6UXG3	332 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	TMC5	Q6UXY8	1006 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	GPR149	Q86SP6	731 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	TMEM161B	Q8NDZ6	487 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	EDA	Q92838	391 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	INTS4	Q96HW7	963 aa	Known RBP	13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	CDK5RAP3	Q96JB5	506 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	ZBTB45	Q96K62	511 aa	Predicted RBP	13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	PPP1R10	Q96QC0	940 aa	Known RBP	13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	SFXN1	Q9H9B4	322 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	KCND2	Q9NZV8	630 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	SSX2IP	Q9Y2D8	614 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	RBM19	Q9Y4C8	960 aa	Known RBP	13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	CLIC4	Q9Y696	253 aa		13.23	□□□□□ -0.29
CHFR-208	ENST00000511001	C2CD4D	B7Z1M9	353 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	MEFV	O15553	781 aa	Predicted RBP	13.22	□□□□□ -0.29

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