RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-231	ENST00000510245	PMS1	P54277	932 aa	Known RBP	8.99	□□□□□ -0.97
CAST-231	ENST00000510245	ARHGAP8	P85298	464 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	COASY	Q13057	564 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	ADAM15	Q13444	863 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	MTERF2	Q49AM1	385 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	CERKL	Q49MI3	558 aa	Predicted RBP	8.99	□□□□□ -0.97
CAST-231	ENST00000510245	SFRP5	Q5T4F7	317 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	SDE2	Q6IQ49	451 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	LILRB2	Q8N423	598 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	MAGEB6	Q8N7X4	407 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	ZNF384	Q8TF68	577 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	HRASLS5	Q96KN8	279 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	YME1L1	Q96TA2	773 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	LMAN2L	Q9H0V9	348 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	BICC1	Q9H694	974 aa	Known RBP	8.99	□□□□□ -0.97
CAST-231	ENST00000510245	NCDN	Q9UBB6	729 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	PDS5A	Q29RF7	1337 aa	Known RBP	8.99	□□□□□ -0.97
CAST-231	ENST00000510245	SCN5A	Q14524	2016 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	ASH1L	Q9NR48	2969 aa	Known RBP	8.98	□□□□□ -0.97
CAST-231	ENST00000510245	BAG3	O95817	575 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	CBX7	O95931	251 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	AMH	P03971	560 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	CTNNB1	P35222	781 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	CCNF	P41002	786 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	PRKCQ	Q04759	706 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	IFRD2	Q12894	506 aa	Predicted RBP	8.98	□□□□□ -0.97
CAST-231	ENST00000510245	AXDND1	Q5T1B0	1012 aa	Predicted RBP	8.98	□□□□□ -0.97
CAST-231	ENST00000510245	NFXL1	Q6ZNB6	911 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	ABI1	Q8IZP0	508 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	MYOCD	Q8IZQ8	938 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	DTWD2	Q8NBA8	298 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	AFAP1L1	Q8TED9	768 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	C11orf84	Q9BUA3	381 aa	Predicted RBP	8.98	□□□□□ -0.97
CAST-231	ENST00000510245	RAI14	Q9P0K7	980 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	VAV3	Q9UKW4	847 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	SORCS3	Q9UPU3	1222 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	DMD	P11532	3685 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	ZFYVE26	Q68DK2	2539 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	SIPA1L1	O43166	1804 aa		8.98	□□□□□ -0.97
CAST-231	ENST00000510245	EYA2	O00167	538 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	SUSD5	O60279	629 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	PARN	O95453	639 aa	Known RBP	8.97	□□□□□ -0.97
CAST-231	ENST00000510245	ATF7	P17544	494 aa	Predicted RBP	8.97	□□□□□ -0.97
CAST-231	ENST00000510245	CYP7A1	P22680	504 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	SP100	P23497	879 aa	Predicted RBP	8.97	□□□□□ -0.97
CAST-231	ENST00000510245	CD96	P40200	585 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	HTRA4	P83105	476 aa	Predicted RBP	8.97	□□□□□ -0.97
CAST-231	ENST00000510245	NCAPH	Q15003	741 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	TWISTNB	Q3B726	338 aa	Predicted RBP	8.97	□□□□□ -0.97
CAST-231	ENST00000510245	TATDN1	Q6P1N9	297 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	LRRC8D	Q7L1W4	858 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	CCDC144CP	Q8IYA2	1237 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	SPICE1	Q8N0Z3	855 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	AGBL5	Q8NDL9	886 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	CAGE1	Q8TC20	777 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	NSUN4	Q96CB9	384 aa	Known RBP	8.97	□□□□□ -0.97
CAST-231	ENST00000510245	KAZALD1	Q96I82	304 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	AATF	Q9NY61	560 aa	Known RBP eCLIP	8.97	□□□□□ -0.97
CAST-231	ENST00000510245	CLEC1B	Q9P126	229 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	CEP131	Q9UPN4	1083 aa		8.97	□□□□□ -0.97
CAST-231	ENST00000510245	TANC1	Q9C0D5	1861 aa		8.96	□□□□□ -0.97
CAST-231	ENST00000510245	DNAJC25-GNG10	A0A024R161	153 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	PROS1	P07225	676 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	MYL3	P08590	195 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	CD8B	P10966	210 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	AOC1	P19801	751 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	PTGS1	P23219	599 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	SEPT2	Q15019	361 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	SLC10A6	Q3KNW5	377 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	RABL6	Q3YEC7	729 aa	Predicted RBP	8.96	□□□□□ -0.98
CAST-231	ENST00000510245	CDKAL1	Q5VV42	579 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	CWF19L1	Q69YN2	538 aa	Known RBP	8.96	□□□□□ -0.98
CAST-231	ENST00000510245	SECISBP2L	Q93073	1101 aa	Known RBP	8.96	□□□□□ -0.98
CAST-231	ENST00000510245	DHRS1	Q96LJ7	313 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	KREMEN1	Q96MU8	473 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	LGR4	Q9BXB1	951 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	MKRN2	Q9H000	416 aa	Known RBP	8.96	□□□□□ -0.98
CAST-231	ENST00000510245	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	8.96	□□□□□ -0.98
CAST-231	ENST00000510245	SUSD2	Q9UGT4	822 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	SERPINB13	Q9UIV8	391 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	BARX2	Q9UMQ3	279 aa	Predicted RBP	8.96	□□□□□ -0.98
CAST-231	ENST00000510245	SNX11	Q9Y5W9	270 aa		8.96	□□□□□ -0.98
CAST-231	ENST00000510245	GCN1	Q92616	2671 aa	Known RBP	8.96	□□□□□ -0.98
CAST-231	ENST00000510245	PTPRS	Q13332	1948 aa		8.95	□□□□□ -0.98
CAST-231	ENST00000510245		A0A1W2PRG0	241 aa		8.95	□□□□□ -0.98
CAST-231	ENST00000510245	VWA5A	O00534	786 aa		8.95	□□□□□ -0.98
CAST-231	ENST00000510245	MPHOSPH10	O00566	681 aa	Known RBP	8.95	□□□□□ -0.98
CAST-231	ENST00000510245	GRM6	O15303	877 aa		8.95	□□□□□ -0.98
CAST-231	ENST00000510245	CBFA2T2	O43439	604 aa		8.95	□□□□□ -0.98
CAST-231	ENST00000510245	ALDH1L1	O75891	902 aa		8.95	□□□□□ -0.98
CAST-231	ENST00000510245	CXCL10	P02778	98 aa		8.95	□□□□□ -0.98
CAST-231	ENST00000510245	EPHX1	P07099	455 aa		8.95	□□□□□ -0.98
CAST-231	ENST00000510245	ZNF200	P98182	395 aa	Predicted RBP	8.95	□□□□□ -0.98
CAST-231	ENST00000510245	PLCL1	Q15111	1095 aa		8.95	□□□□□ -0.98
CAST-231	ENST00000510245	NKPD1	Q17RQ9	610 aa		8.95	□□□□□ -0.98
CAST-231	ENST00000510245	TCTN1	Q2MV58	587 aa		8.95	□□□□□ -0.98
CAST-231	ENST00000510245	NFRKB	Q6P4R8	1299 aa		8.95	□□□□□ -0.98
CAST-231	ENST00000510245	LRSAM1	Q6UWE0	723 aa		8.95	□□□□□ -0.98
CAST-231	ENST00000510245	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	8.95	□□□□□ -0.98
CAST-231	ENST00000510245	EEPD1	Q7L9B9	569 aa		8.95	□□□□□ -0.98

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms