RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 RCAN3Q9UKA8 241 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 ARID4BQ4LE39 1312 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 ABCA9Q8IUA7 1624 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 NUP155O75694 1391 aa9.01□□□□□ -0.97
TRAPPC11-206ENST00000509857 MSX2P35548 267 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC11-206ENST00000509857 MST1LQ2TV78 715 aa9.01□□□□□ -0.97
TRAPPC11-206ENST00000509857 FAM111BQ6SJ93 734 aa9.01□□□□□ -0.97
TRAPPC11-206ENST00000509857 MAMDC4Q6UXC1 1216 aa9.01□□□□□ -0.97
TRAPPC11-206ENST00000509857 LILRA3Q8N6C8 439 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC11-206ENST00000509857 STAG1Q8WVM7 1258 aa9.01□□□□□ -0.97
TRAPPC11-206ENST00000509857 EDAQ92838 391 aa9.01□□□□□ -0.97
TRAPPC11-206ENST00000509857 DDX56Q9NY93 547 aaKnown RBP9.01□□□□□ -0.97
TRAPPC11-206ENST00000509857 IQGAP3Q86VI3 1631 aa9.01□□□□□ -0.97
TRAPPC11-206ENST00000509857 NCANO14594 1321 aa9.01□□□□□ -0.97
TRAPPC11-206ENST00000509857 TNKSO95271 1327 aa9.01□□□□□ -0.97
TRAPPC11-206ENST00000509857 RPTORQ8N122 1335 aa9.01□□□□□ -0.97
TRAPPC11-206ENST00000509857 B8ZZF3 427 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 PCDHGA12O60330 932 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 PHF2O75151 1096 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 GYPEP15421 78 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 MCAMP43121 646 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 NPEPPSP55786 919 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 CCT2P78371 535 aaKnown RBP9□□□□□ -0.97
TRAPPC11-206ENST00000509857 PPP3CAQ08209 521 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 HS1BP3Q53T59 392 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 CHST13Q8NET6 341 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 GPR156Q8NFN8 814 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 ZNF480Q8WV37 535 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 RIN2Q8WYP3 895 aaPredicted RBP9□□□□□ -0.97
TRAPPC11-206ENST00000509857 TCAF1Q9Y4C2 921 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 PCDHGA9Q9Y5G4 932 aaKnown RBP9□□□□□ -0.97
TRAPPC11-206ENST00000509857 PCDHGA8Q9Y5G5 932 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 PCDHGA7Q9Y5G6 932 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 PCDHGA6Q9Y5G7 932 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 PCDHGA3Q9Y5H0 932 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 PCDHGA2Q9Y5H1 932 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 FAM135AQ9P2D6 1515 aa9□□□□□ -0.97
TRAPPC11-206ENST00000509857 POLR1AO95602 1720 aaPredicted RBP9□□□□□ -0.97
TRAPPC11-206ENST00000509857 PRRG2O14669 202 aa8.99□□□□□ -0.97
TRAPPC11-206ENST00000509857 GASTP01350 101 aa8.99□□□□□ -0.97
TRAPPC11-206ENST00000509857 HNRNPMP52272 730 aaKnown RBP eCLIP8.99□□□□□ -0.97
TRAPPC11-206ENST00000509857 ADAM17P78536 824 aa8.99□□□□□ -0.97
TRAPPC11-206ENST00000509857 DUSP2Q05923 314 aa8.99□□□□□ -0.97
TRAPPC11-206ENST00000509857 JADE3Q92613 823 aa8.99□□□□□ -0.97
TRAPPC11-206ENST00000509857 HOXB13Q92826 284 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC11-206ENST00000509857 DVL3Q92997 716 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC11-206ENST00000509857 BORCS6Q96GS4 357 aa8.99□□□□□ -0.97
TRAPPC11-206ENST00000509857 TMEM176AQ96HP8 235 aa8.99□□□□□ -0.97
TRAPPC11-206ENST00000509857 KLC2Q9H0B6 622 aa8.99□□□□□ -0.97
TRAPPC11-206ENST00000509857 RBM12Q9NTZ6 932 aaKnown RBP8.99□□□□□ -0.97
TRAPPC11-206ENST00000509857 SH3BP1Q9Y3L3 701 aa8.99□□□□□ -0.97
TRAPPC11-206ENST00000509857 SPATA31E1Q6ZUB1 1445 aa8.98□□□□□ -0.97
TRAPPC11-206ENST00000509857 CASRP41180 1078 aa8.98□□□□□ -0.97
TRAPPC11-206ENST00000509857 R3HDM1Q15032 1099 aaKnown RBP8.98□□□□□ -0.97
TRAPPC11-206ENST00000509857 PCBP2Q15366 365 aaKnown RBP eCLIP8.98□□□□□ -0.97
TRAPPC11-206ENST00000509857 CLUL1Q15846 466 aa8.98□□□□□ -0.97
TRAPPC11-206ENST00000509857 FAM89AQ96GI7 184 aa8.98□□□□□ -0.97
TRAPPC11-206ENST00000509857 GPRC5DQ9NZD1 345 aa8.98□□□□□ -0.97
TRAPPC11-206ENST00000509857 NCDNQ9UBB6 729 aa8.98□□□□□ -0.97
TRAPPC11-206ENST00000509857 CFAP74Q9C0B2 1584 aa8.98□□□□□ -0.97
TRAPPC11-206ENST00000509857 RALGAPBQ86X10 1494 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 KLHL33A6NCF5 533 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 PDGFRBP09619 1106 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 ZNF20P17024 532 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 CRHR1P34998 444 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 MGAT2Q10469 447 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 MRPL49Q13405 166 aaKnown RBP8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 MFSD5Q6N075 450 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 FAM180AQ6UWF9 173 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 D2HGDHQ8N465 521 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 DEF6Q9H4E7 631 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 DMRT3Q9NQL9 472 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 TRPS1Q9UHF7 1281 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 ZBTB21Q9ULJ3 1066 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 MRFAP1Q9Y605 127 aa8.97□□□□□ -0.97
TRAPPC11-206ENST00000509857 NEURL4Q96JN8 1562 aa8.96□□□□□ -0.97
TRAPPC11-206ENST00000509857 EIF2AK4Q9P2K8 1649 aaKnown RBP8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 ANP32CO43423 234 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 AKR1B10O60218 316 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 ITGA10O75578 1167 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 ACO1P21399 889 aaKnown RBP8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 WASP42768 502 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 CDSNQ15517 529 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 PTPN21Q16825 1174 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 FKBP15Q5T1M5 1219 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 Q6ZVL8 140 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 PRRT2Q7Z6L0 340 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 OR5M3Q8NGP4 307 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 ARL8AQ96BM9 186 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 IL17RAQ96F46 866 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 ZNF512Q96ME7 567 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 SLC2A13Q96QE2 648 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 SMAD5Q99717 465 aaKnown RBP8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 ADI1Q9BV57 179 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 TUBD1Q9UJT1 453 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 TESMINQ9Y4I5 508 aa8.96□□□□□ -0.98
TRAPPC11-206ENST00000509857 C5AR1P21730 350 aa8.95□□□□□ -0.98
TRAPPC11-206ENST00000509857 GZMKP49863 264 aa8.95□□□□□ -0.98
TRAPPC11-206ENST00000509857 SPTY2D1Q68D10 685 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC11-206ENST00000509857 ZNF585AQ6P3V2 769 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms