RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PHLPP2Q6ZVD8 1323 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 ANK1P16157 1881 aa7.96□□□□□ -1.14
TOPBP1-207ENST00000509162 TSC2P49815 1807 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 FAM237AA0A1B0GTK4 181 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 FRMD3A2A2Y4 597 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 DENND3A2RUS2 1198 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 TBKBP1A7MCY6 615 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 C5orf67F2Z3F1 127 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 INO80B-WBP1J3KQ70 363 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 PTGESO14684 152 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 INPPL1O15357 1258 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 SLC26A4O43511 780 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 ZNF623O75123 536 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 OFD1O75665 1012 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 NPTXRO95502 500 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 EFEMP2O95967 443 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 SSBP05455 408 aaKnown RBP eCLIP7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 ITGB1P05556 798 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 MAPTP10636 758 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 FOSL2P15408 326 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 PROZP22891 400 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 CTNNB1P35222 781 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 DNM2P50570 870 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 POU5F1BQ06416 359 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 DHX8Q14562 1220 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 MXD4Q14582 209 aaPredicted RBP7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 NR6A1Q15406 480 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 MSS51Q4VC12 460 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 RESP18Q5W5W9 173 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 ADGRD2Q7Z7M1 963 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 RETREG3Q86VR2 466 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 SFR1Q86XK3 245 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 ZSWIM2Q8NEG5 633 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 LARP4BQ92615 738 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 KCNN1Q92952 543 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 HPS3Q969F9 1004 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 FAM84AQ96KN4 292 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 TGS1Q96RS0 853 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 STRA6Q9BX79 667 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 RAB34Q9BZG1 259 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 INO80BQ9C086 356 aaPredicted RBP7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 TYW1Q9NV66 732 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 TBC1D13Q9NVG8 400 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 DNAJB4Q9UDY4 337 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 RCOR1Q9UKL0 485 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 DNM3Q9UQ16 869 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 HPSEQ9Y251 543 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 INSL6Q9Y581 213 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 PCDHB2Q9Y5E7 798 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 MYO9BQ13459 2157 aa7.95□□□□□ -1.14
TOPBP1-207ENST00000509162 VWA8A3KMH1 1905 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 A0A1B0GUA9 196 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 ASAP2O43150 1006 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 DDHD2O94830 711 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 CSPG5O95196 566 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 PLS3P13797 630 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 PFKFB1P16118 471 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 LIG1P18858 919 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 NCLP19338 710 aaKnown RBP7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 POU3F3P20264 500 aaPredicted RBP7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 AKAP5P24588 427 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 NMT1P30419 496 aaKnown RBP7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 GTF2F1P35269 517 aaKnown RBP eCLIP7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 MLH1P40692 756 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 UBA7P41226 1012 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 RPIAP49247 311 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 SCNN1GP51170 649 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 WNT7BP56706 349 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 RBM10P98175 930 aaKnown RBP7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 EHHADHQ08426 723 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 BTG3Q14201 252 aaPredicted RBP7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 PLA2G2CQ5R387 149 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 TWF2Q6IBS0 349 aaKnown RBP7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 ZNF280BQ86YH2 543 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 PDILTQ8N807 584 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 COLGALT1Q8NBJ5 622 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 RNF169Q8NCN4 708 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 VN1R2Q8NFZ6 395 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 MAFAQ8NHW3 353 aaPredicted RBP7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 KIFAP3Q92845 792 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 ZBTB45Q96K62 511 aaPredicted RBP7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 CCDC43Q96MW1 224 aaKnown RBP7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 PAAF1Q9BRP4 392 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 TARS2Q9BW92 718 aaKnown RBP7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 PANK2Q9BZ23 570 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 TMEM117Q9H0C3 514 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 NT5C3AQ9H0P0 336 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 NRDE2Q9H7Z3 1164 aa7.94□□□□□ -1.14
TOPBP1-207ENST00000509162 H3BNC9 293 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 ACKR2O00590 384 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 FSCN2O14926 492 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 KLRC4O43908 158 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 CUTAO60888 179 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 RECQL4O94761 1208 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 HSP90AA1P07900 732 aaKnown RBP7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 MYBP10242 640 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 HOXD13P35453 343 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 BMPR1AP36894 532 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 SLC11A1P49279 550 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 SOX4Q06945 474 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms