RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 KIAA0319Q5VV43 1072 aa11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 CCDC149Q6ZUS6 474 aa11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 OTOP3Q7RTS5 596 aa11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 BMP8AQ7Z5Y6 402 aa11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 GPR149Q86SP6 731 aa11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 UBALD2Q8IYN6 164 aa11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 KREMEN2Q8NCW0 462 aa11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 BSNDQ8WZ55 320 aa11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 PDZD7Q9H5P4 517 aa11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 MARCH5Q9NX47 278 aa11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 SNTG2Q9NY99 539 aa11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 LIMD1Q9UGP4 676 aa11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 ADAM28Q9UKQ2 775 aa11.12□□□□□ -0.63
UBE2D3-227ENST00000508818 MUC6Q6W4X9 2439 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 TTLL13PA6NNM8 815 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 TEX28O15482 410 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 THP07101 528 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 MYBP10242 640 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 PRPHP41219 470 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 MCM2P49736 904 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 TOB1P50616 345 aaPredicted RBP11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 DSG1Q02413 1049 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 TUSC3Q13454 348 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 MTMR3Q13615 1198 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 HSP90AA2PQ14568 343 aaPredicted RBP11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 ECM1Q16610 540 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 DCAF4L1Q3SXM0 396 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 ATF7IP2Q5U623 682 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 FUT10Q6P4F1 479 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 MAMSTRQ6ZN01 415 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 PALB2Q86YC2 1186 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 ZDHHC14Q8IZN3 488 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 FBXL6Q8N531 539 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 IGSF22Q8N9C0 903 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 GSTCDQ8NEC7 633 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 RIN2Q8WYP3 895 aaPredicted RBP11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 RABGGTAQ92696 567 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 CDK5RAP3Q96JB5 506 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 TMX3Q96JJ7 454 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 DRC1Q96MC2 740 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 PRRX2Q99811 253 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 TCHPQ9BT92 498 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 KIFC3Q9BVG8 833 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 PIDD1Q9HB75 910 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 RXFP1Q9HBX9 757 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 MAN1C1Q9NR34 630 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 KCNG1Q9UIX4 513 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 SORCS3Q9UPU3 1222 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 SMC3Q9UQE7 1217 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 USTQ9Y2C2 406 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 GDAQ9Y2T3 454 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 ZMYM2Q9UBW7 1377 aa11.11□□□□□ -0.63
UBE2D3-227ENST00000508818 SF3B1O75533 1304 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■■■■■ 50.5
UBE2D3-227ENST00000508818 CCDC195A0A1B0GUA6 201 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 CASTOR2A6NHX0 329 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 E9PMD0 336 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 F8W810 466 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 RECQL4O94761 1208 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 SPATA31D3P0C874 917 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 GJB2P29033 226 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 YARSP54577 528 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 PEX3P56589 373 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 ELAVL2Q12926 359 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 DMP1Q13316 513 aaPredicted RBP11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 C15orf39Q6ZRI6 1047 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 SPATA31D4Q6ZUB0 917 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 CEP57Q86XR8 500 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 GLYCTKQ8IVS8 523 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 STAMQ92783 540 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 B3GALT6Q96L58 329 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 GPR62Q9BZJ7 368 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 CCDC113Q9H0I3 377 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 KMT5AQ9NQR1 393 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 CHST7Q9NS84 486 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 USP20Q9Y2K6 914 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 RBM19Q9Y4C8 960 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 TECTAO75443 2155 aa11.1□□□□□ -0.63
UBE2D3-227ENST00000508818 PHLPP2Q6ZVD8 1323 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 PP2D1A8MPX8 630 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 HIP1RO75146 1068 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 ASGR2P07307 311 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 CDC25AP30304 524 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 GBP2P32456 591 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 SMTNP53814 917 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 STRN3Q13033 797 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 IER5LQ5T953 404 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 FAM171A1Q5VUB5 890 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 EEF1DP3Q658K8 133 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 LARP1BQ659C4 914 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 PDXDC1Q6P996 788 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 CYP26C1Q6V0L0 522 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 GPR65Q8IYL9 337 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 CMASQ8NFW8 434 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 HASPINQ8TF76 798 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 HDAC7Q8WUI4 952 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 SMG7Q92540 1137 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 TTPALQ9BTX7 342 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms