RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FOSP01100 380 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 HOXC6P09630 235 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 HSPA1AP0DMV8 641 aaKnown RBP6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 HSPA1BP0DMV9 641 aaKnown RBP6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 ALAS1P13196 640 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 PDCP20941 246 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 ETFBP38117 255 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 PSMC4P43686 418 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 SERINC3Q13530 473 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 TRIM29Q14134 588 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 GRB14Q14449 540 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 PKN1Q16512 942 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 PKN2Q16513 984 aaKnown RBP6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 RNF207Q6ZRF8 634 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 NOL8Q76FK4 1167 aaKnown RBP6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 GPR142Q7Z601 462 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 RAB11FIP4Q86YS3 637 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 NECAB1Q8N987 351 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 FAM184AQ8NB25 1140 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 DNERQ8NFT8 737 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 PHKBQ93100 1093 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 UBE2FQ969M7 185 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 ANAPC16Q96DE5 110 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 DDX11Q96FC9 970 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 MMP19Q99542 508 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 ZMYND12Q9H0C1 365 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 CPVLQ9H3G5 476 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 ADD3Q9UEY8 706 aaKnown RBP6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 SMC3Q9UQE7 1217 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 SNX11Q9Y5W9 270 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 MRVI1Q9Y6F6 885 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 ZNF236Q9UL36 1845 aa6.26□□□□□ -1.41
HMGB1P44-201ENST00000508597 PLXNB2O15031 1838 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 DNAJC25-GNG10A0A024R161 153 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 SHISA3A0PJX4 238 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 PTPDC1A2A3K4 754 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 SMCO2A6NFE2 343 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 GCOM1H8Y6P7 765 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 STXBP3O00186 592 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 KLF4O43474 513 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 PPP1R11O60927 126 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 HSP90AA1P07900 732 aaKnown RBP6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 POLR2MP0CAP2 368 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 HSPA8P11142 646 aaKnown RBP6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 FDPSP14324 419 aaKnown RBP6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 NME1P15531 152 aaKnown RBP6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 RAG1P15918 1043 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 GBP1P32455 592 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 ANP32AP39687 249 aaKnown RBP6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 RGS2P41220 211 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 HSD17B4P51659 736 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 ADCY7P51828 1080 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 NAPAP54920 295 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 ST3GAL1Q11201 340 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 SAFBQ15424 915 aaKnown RBP eCLIP6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 USH1GQ495M9 461 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 WDR78Q5VTH9 848 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 WWC2Q6AWC2 1192 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 DPH6Q7L8W6 267 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 NLRC3Q7RTR2 1065 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 HEATR3Q7Z4Q2 680 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 KRTAP1-3Q8IUG1 177 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 ANKRD35Q8N283 1001 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 FAM169BQ8N8A8 192 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 DTWD2Q8NBA8 298 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 DAGLBQ8NCG7 672 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 CLEC4DQ8WXI8 215 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 IWS1Q96ST2 819 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 TM9SF2Q99805 663 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 ALG1Q9BT22 464 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 PORCNQ9H237 461 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 R3HDMLQ9H3Y0 253 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 PSTPIP2Q9H939 334 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 RIC8AQ9NPQ8 531 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 A1CFQ9NQ94 594 aaKnown RBP6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 MBNL3Q9NUK0 354 aaKnown RBP6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 CYP39A1Q9NYL5 469 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 SRRDQ9UH36 339 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 GJD2Q9UKL4 321 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 RIPK3Q9Y572 518 aa6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 RBBP6Q7Z6E9 1792 aaKnown RBP6.25□□□□□ -1.41
HMGB1P44-201ENST00000508597 PLXNA1Q9UIW2 1896 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 ASB14A6NK59 587 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 SMAD7O15105 426 aaKnown RBP6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 FOXN1O15353 648 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 STAM2O75886 525 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 RNASE1P07998 156 aaKnown RBP6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 SRFP11831 508 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 CAPN2P17655 700 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 FUT4P22083 530 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 ADORA2AP29274 412 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 NLRP5P59047 1200 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 SNAP25P60880 206 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 RPS6P62753 249 aaKnown RBP6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 SNW1Q13573 536 aaKnown RBP6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 ZNF792Q3KQV3 632 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 MUM1L1Q5H9M0 696 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 FBXW10Q5XX13 1052 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 OLFML2BQ68BL8 750 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 XRRA1Q6P2D8 792 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms