RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 RGS12O14924 1447 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 KIDINS220Q9ULH0 1771 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 EIF3AQ14152 1382 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 MYPNQ86TC9 1320 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 ROBO1Q9Y6N7 1651 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 MED14O60244 1454 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 PRXQ9BXM0 1461 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 VIRMAQ69YN4 1812 aaKnown RBP5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 ZNF891A8MT65 544 aaPredicted RBP5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 GRXCR1A8MXD5 290 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 GAS7O60861 476 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 FRAT2O75474 233 aaPredicted RBP5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 ALDH1A2O94788 518 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 CFBP00751 764 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 NR4A1P22736 598 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 CD40P25942 277 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 RBM6P78332 1123 aaKnown RBP5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 APBB1IPQ7Z5R6 666 aaPredicted RBP5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 ZSCAN30Q86W11 494 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 SYNE4Q8N205 404 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 CHTF18Q8WVB6 975 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 CRAMP1Q96RY5 1269 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 MLST8Q9BVC4 326 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 CCDC94Q9BW85 323 aaPredicted RBP5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 THG1LQ9NWX6 298 aaKnown RBP5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 MYO5CQ9NQX4 1742 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 NINLQ9Y2I6 1382 aa5.54□□□□□ -1.52
PDLIM5-211ENST00000508531 FAM135AQ9P2D6 1515 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 ITSN2Q9NZM3 1697 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 SPATA31A6Q5VVP1 1343 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 KIF14Q15058 1648 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 KIF3BO15066 747 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 PPFIA2O75334 1257 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 F2P00734 622 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 NEK4P51957 841 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 HMGN5P82970 282 aaKnown RBP5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 COL10A1Q03692 680 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 CD69Q07108 199 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 DCAF17Q5H9S7 520 aaPredicted RBP5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 NAIF1Q69YI7 327 aaPredicted RBP5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 RHOUQ7L0Q8 258 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 CREBRFQ8IUR6 639 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 VRK3Q8IV63 474 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 FAM9BQ8IZU0 186 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 EFHBQ8N7U6 833 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 CPT1CQ8TCG5 803 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 LENG9Q96B70 501 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 CPPED1Q9BRF8 314 aaPredicted RBP5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 ORAI3Q9BRQ5 295 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 ENKD1Q9H0I2 346 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 EPC1Q9H2F5 836 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 INTS7Q9NVH2 962 aaKnown RBP5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 USP18Q9UMW8 372 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 PCDHB6Q9Y5E3 794 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 MIA2Q96PC5 1412 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 TIAM1Q13009 1591 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 SAMD9Q5K651 1589 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 IBTKQ9P2D0 1353 aaPredicted RBP5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 IQGAP1P46940 1657 aa5.53□□□□□ -1.52
PDLIM5-211ENST00000508531 MAPK8IP3Q9UPT6 1336 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 PHLPP1O60346 1717 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 UGGT1Q9NYU2 1555 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 NRP1O14786 923 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 HOXA3O43365 443 aaPredicted RBP5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 XRCC6P12956 609 aaKnown RBP eCLIP5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 CASRP41180 1078 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 PTTG1IPP53801 180 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 DSG1Q02413 1049 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 ZBTB41Q5SVQ8 909 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 MBNL2Q5VZF2 373 aaKnown RBP5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 DEFB132Q7Z7B7 95 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 CXorf67Q86X51 503 aaPredicted RBP5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 PASD1Q8IV76 773 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 UNC5BQ8IZJ1 945 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 OR5M3Q8NGP4 307 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 PPP1R14CQ8TAE6 165 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 PROKR1Q8TCW9 393 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 FERMT2Q96AC1 680 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 GRPEL1Q9HAV7 217 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 MSRAQ9UJ68 235 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 FZD1Q9UP38 647 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 CD2APQ9Y5K6 639 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 XIRP1Q702N8 1843 aaKnown RBP5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 CCDC7Q96M83 1385 aa5.52□□□□□ -1.53
PDLIM5-211ENST00000508531 A2MP01023 1474 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 ST20-MTHFSA0A0A6YYL1 179 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 LCHNA4D1U4 455 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 FAM83GA6ND36 823 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 TGM5O43548 720 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 SCAF4O95104 1147 aaKnown RBP5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 LY86O95711 162 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 ABHD16AO95870 558 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 ITGB1P05556 798 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 HSP90B1P14625 803 aaKnown RBP5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 BMP5P22003 454 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 LRRC32Q14392 662 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 LY6G5CQ5SRR4 150 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 CNNM4Q6P4Q7 775 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms