RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 CKBP12277 381 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 ZNF16P17020 682 aaPredicted RBP10.63□□□□□ -0.71
CLCN3-205ENST00000506924 TOB1P50616 345 aaPredicted RBP10.63□□□□□ -0.71
CLCN3-205ENST00000506924 JAK3P52333 1124 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 SHHQ15465 462 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 RPS26P11Q5JNZ5 115 aaPredicted RBP10.63□□□□□ -0.71
CLCN3-205ENST00000506924 MARCH8Q5T0T0 291 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 ZNF618Q5T7W0 954 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 C16orf59Q7L2K0 433 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 SERINC5Q86VE9 423 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 AFAP1L1Q8TED9 768 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 FAM20AQ96MK3 541 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 HHIPQ96QV1 700 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 SH2D3AQ9BRG2 576 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 FAM49AQ9H0Q0 323 aaPredicted RBP10.63□□□□□ -0.71
CLCN3-205ENST00000506924 TTC12Q9H892 705 aaPredicted RBP10.63□□□□□ -0.71
CLCN3-205ENST00000506924 FAM8A1Q9UBU6 413 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 NOL7Q9UMY1 257 aaKnown RBP10.63□□□□□ -0.71
CLCN3-205ENST00000506924 PCDHB6Q9Y5E3 794 aa10.63□□□□□ -0.71
CLCN3-205ENST00000506924 MYH9P35579 1960 aaKnown RBP10.63□□□□□ -0.71
CLCN3-205ENST00000506924 WDR81Q562E7 1941 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 NRCAMQ92823 1304 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 A0A096LPE4 126 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 A0A1W2PPZ6 126 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 TBX3O15119 743 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 IQCF3P0C7M6 154 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 SYT1P21579 422 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 GSTT1P30711 240 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 HOXC8P31273 242 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 SFNP31947 248 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 BMP8BP34820 402 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 TECP42680 631 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 ADAM17P78536 824 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 PRKCEQ02156 737 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 CYP4A11Q02928 519 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 TMEM62Q0P6H9 643 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 PPP2R5CQ13362 524 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 PPIGQ13427 754 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLCN3-205ENST00000506924 BFSP2Q13515 415 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 TRIM71Q2Q1W2 868 aaKnown RBP10.62□□□□□ -0.71
CLCN3-205ENST00000506924 HABP4Q5JVS0 413 aaKnown RBP10.62□□□□□ -0.71
CLCN3-205ENST00000506924 B3GNT9Q6UX72 402 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 ZNF365Q70YC5 407 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 LRRC8DQ7L1W4 858 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 SLFN12Q8IYM2 578 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 ATP8B4Q8TF62 1192 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 DNAJB3Q8WWF6 145 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 FOXD4L4Q8WXT5 416 aaPredicted RBP10.62□□□□□ -0.71
CLCN3-205ENST00000506924 INTS4Q96HW7 963 aaKnown RBP10.62□□□□□ -0.71
CLCN3-205ENST00000506924 DYDC2Q96IM9 177 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 MTMR9Q96QG7 549 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLCN3-205ENST00000506924 OSBPL7Q9BZF2 842 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 RGL1Q9NZL6 768 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 TUBE1Q9UJT0 475 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 PCDHA12Q9UN75 941 aa10.62□□□□□ -0.71
CLCN3-205ENST00000506924 IGSF9BQ9UPX0 1349 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 A0A087WWV3 80 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 RRN3P2A6NIE6 340 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 H3BRJ5 948 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 HBP1O60381 514 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 OR52Z1P0C646 297 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 SELPP16109 830 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 EIF4BP23588 611 aaKnown RBP10.61□□□□□ -0.71
CLCN3-205ENST00000506924 KLRC1P26715 233 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 GRIA4P48058 902 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 SLC26A2P50443 739 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 SPIRE1Q08AE8 756 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 CTTNQ14247 550 aaKnown RBP10.61□□□□□ -0.71
CLCN3-205ENST00000506924 TMEM240Q5SV17 173 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 PLA2G4FQ68DD2 849 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 FAM117BQ6P1L5 589 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 FAM173BQ6P4H8 233 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 MTHFD1LQ6UB35 978 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 OTOP2Q7RTS6 562 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 TDHQ8IZJ6 230 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 CAGE1Q8TC20 777 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 VWCEQ96DN2 955 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 PPP1R16BQ96T49 567 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 PLVAPQ9BX97 442 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 FTOQ9C0B1 505 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLCN3-205ENST00000506924 LACRTQ9GZZ8 138 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 SOX17Q9H6I2 414 aaPredicted RBP10.61□□□□□ -0.71
CLCN3-205ENST00000506924 IL23AQ9NPF7 189 aa10.61□□□□□ -0.71
CLCN3-205ENST00000506924 WRAP73Q9P2S5 460 aaPredicted RBP10.61□□□□□ -0.71
CLCN3-205ENST00000506924 RSPH10B2B2RC85 870 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 NBNO60934 754 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 RSPH10BP0C881 870 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 PDCP20941 246 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 RAC1P63000 192 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 PSMD2Q13200 908 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 GPNMBQ14956 572 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 EPHA7Q15375 998 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 TCTN1Q2MV58 587 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 MTERF2Q49AM1 385 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 NXPE4Q6UWF7 544 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 TPH2Q8IWU9 490 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 METTL13Q8N6R0 699 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 C4orf32Q8N8J7 132 aa10.6□□□□□ -0.71
CLCN3-205ENST00000506924 RDM1Q8NG50 284 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms