RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 RNF169Q8NCN4 708 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 GSTCDQ8NEC7 633 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 GOLGA5Q8TBA6 731 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 HELQQ8TDG4 1101 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 RSPH1Q8WYR4 309 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 POMGNT1Q8WZA1 660 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 ZBED2Q9BTP6 218 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 TMEM117Q9H0C3 514 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 SEMA6BQ9H3T3 888 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 RSAD1Q9HA92 442 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 DMAC2Q9NW81 257 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 CPSF3Q9UKF6 684 aaKnown RBP14.02□□□□□ -0.17
TCOF1-210ENST00000506767 PCDHA11Q9Y5I1 949 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 SZT2Q5T011 3432 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 TLL1O43897 1013 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 RECQL4O94761 1208 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 LDHAP00338 332 aaKnown RBP14.01□□□□□ -0.17
TCOF1-210ENST00000506767 ADRB2P07550 413 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 CLTAP09496 248 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 HARSP12081 509 aaKnown RBP14.01□□□□□ -0.17
TCOF1-210ENST00000506767 TNFSF9P41273 254 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 MATR3P43243 847 aaKnown RBP eCLIP14.01□□□□□ -0.17
TCOF1-210ENST00000506767 AFF1P51825 1210 aaKnown RBP14.01□□□□□ -0.17
TCOF1-210ENST00000506767 MYBPC2Q14324 1141 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 ZBTB41Q5SVQ8 909 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 SLC9A9Q8IVB4 645 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 CMTR2Q8IYT2 770 aaKnown RBP14.01□□□□□ -0.17
TCOF1-210ENST00000506767 ZSWIM2Q8NEG5 633 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 SYAP1Q96A49 352 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-210ENST00000506767 DHTKD1Q96HY7 919 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-210ENST00000506767 FBXL18Q96ME1 805 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 ACAP3Q96P50 834 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 CCDC94Q9BW85 323 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-210ENST00000506767 APOL6Q9BWW8 343 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 PBX4Q9BYU1 374 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 CXCL16Q9H2A7 254 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 PCIF1Q9H4Z3 704 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 MIOSQ9NXC5 875 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 HSPBP1Q9NZL4 362 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 PARP2Q9UGN5 583 aa14.01□□□□□ -0.17
TCOF1-210ENST00000506767 ARL5CA6NH57 179 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 TBKBP1A7MCY6 615 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 CLIC2O15247 247 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 CALUO43852 315 aaPredicted RBP14□□□□□ -0.17
TCOF1-210ENST00000506767 EXTL3O43909 919 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 CCNE1P24864 410 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 PBX2P40425 430 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 ACOT2P49753 483 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 NLRP12P59046 1061 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 OSTNP61366 133 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 STIM1Q13586 685 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 EDRF1Q3B7T1 1238 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 SLC10A6Q3KNW5 377 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 FOXR2Q6PJQ5 311 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 GLB1LQ6UWU2 654 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 LRRC55Q6ZSA7 311 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 GPD1LQ8N335 351 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 MLKLQ8NB16 471 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 SAAL1Q96ER3 474 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 ZFP42Q96MM3 310 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 YME1L1Q96TA2 773 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 GAD1Q99259 594 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 PLEKHA5Q9HAU0 1116 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 KLK14Q9P0G3 267 aa14□□□□□ -0.17
TCOF1-210ENST00000506767 YBX2Q9Y2T7 364 aaKnown RBP14□□□□□ -0.17
TCOF1-210ENST00000506767 RALGAPA2Q2PPJ7 1873 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 CITO14578 2027 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 TTC26A0AVF1 554 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 LCHNA4D1U4 455 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 PTGESO14684 152 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 PSMA7O14818 248 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 NR3C1P04150 777 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 LINC00271P0C7V0 271 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 MYOGP15173 224 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 MLH1P40692 756 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 PMS1P54277 932 aaKnown RBP13.99□□□□□ -0.17
TCOF1-210ENST00000506767 YARSP54577 528 aaKnown RBP13.99□□□□□ -0.17
TCOF1-210ENST00000506767 RAB30Q15771 203 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 ENOX2Q16206 610 aaKnown RBP13.99□□□□□ -0.17
TCOF1-210ENST00000506767 NOMO2Q5JPE7 1267 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 ANKRD40Q6AI12 368 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 ZC3H3Q8IXZ2 948 aaKnown RBP13.99□□□□□ -0.17
TCOF1-210ENST00000506767 ABI1Q8IZP0 508 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 P2RX5Q93086 422 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 SNX27Q96L92 541 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 FAM213AQ9BRX8 229 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 CWH43Q9H720 699 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 KIAA1586Q9HCI6 787 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 TOPORSQ9NS56 1045 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-210ENST00000506767 TBC1D13Q9NVG8 400 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 CNTN3Q9P232 1028 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 KANSL3Q9P2N6 904 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 ANK1P16157 1881 aa13.99□□□□□ -0.17
TCOF1-210ENST00000506767 TRIP11Q15643 1979 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 PDCD11Q14690 1871 aaKnown RBP13.98□□□□□ -0.17
TCOF1-210ENST00000506767 GOLGA8IPA6NC78 632 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 GOLGA8JA6NMD2 632 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 ARHGEF15O94989 841 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 CXCL8P10145 99 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 KCNE1P15382 129 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms