RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 PPME1Q9Y570 386 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 PCDHB13Q9Y5F0 798 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 MEIS3P2A8K0S8 358 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 C9IYK1 514 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 K7ENM7 598 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 N4BP3O15049 544 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 TEX33O43247 280 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 CALUO43852 315 aaPredicted RBP15.16■□□□□ 0.02
SERF1B-204ENST00000506542 CSPG5O95196 566 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 KCNA1Q09470 495 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 FILIP1Q7Z7B0 1213 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 JPH2Q9BR39 696 aaPredicted RBP15.16■□□□□ 0.02
SERF1B-204ENST00000506542 TUBGCP2Q9BSJ2 902 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 FTHL17Q9BXU8 183 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 VPS16Q9H269 839 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 INSL6Q9Y581 213 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 ATG2AQ2TAZ0 1938 aa15.16■□□□□ 0.02
SERF1B-204ENST00000506542 DGKIO75912 1065 aa15.15■□□□□ 0.02
SERF1B-204ENST00000506542 LINC00271P0C7V0 271 aa15.15■□□□□ 0.02
SERF1B-204ENST00000506542 FOSL2P15408 326 aa15.15■□□□□ 0.02
SERF1B-204ENST00000506542 IGFBP4P22692 258 aa15.15■□□□□ 0.02
SERF1B-204ENST00000506542 PBX1P40424 430 aa15.15■□□□□ 0.02
SERF1B-204ENST00000506542 NCKAP1LP55160 1127 aa15.15■□□□□ 0.02
SERF1B-204ENST00000506542 PEX3P56589 373 aa15.15■□□□□ 0.02
SERF1B-204ENST00000506542 CATSPER4Q7RTX7 472 aa15.15■□□□□ 0.02
SERF1B-204ENST00000506542 ZNF410Q86VK4 478 aa15.15■□□□□ 0.02
SERF1B-204ENST00000506542 CDR2LQ86X02 465 aaPredicted RBP15.15■□□□□ 0.02
SERF1B-204ENST00000506542 PPM1EQ8WY54 764 aa15.15■□□□□ 0.02
SERF1B-204ENST00000506542 LPPQ93052 612 aa15.15■□□□□ 0.02
SERF1B-204ENST00000506542 CPB2Q96IY4 423 aa15.15■□□□□ 0.02
SERF1B-204ENST00000506542 PIN4Q9Y237 131 aaKnown RBP15.15■□□□□ 0.02
SERF1B-204ENST00000506542 TMEM265A0A087WTH1 108 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 TTLL13PA6NNM8 815 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 LGALS16A8MUM7 142 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 B4GALT5O43286 388 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 TGFB1I1O43294 461 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 NR2F2P24468 414 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 MTIF2P46199 727 aaKnown RBP15.14■□□□□ 0.01
SERF1B-204ENST00000506542 GSDMDP57764 484 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 GTF2BQ00403 316 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 DMP1Q13316 513 aaPredicted RBP15.14■□□□□ 0.01
SERF1B-204ENST00000506542 CCDC85BQ15834 202 aaPredicted RBP15.14■□□□□ 0.01
SERF1B-204ENST00000506542 NFIL3Q16649 462 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 SPECC1LQ69YQ0 1117 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 SLC24A5Q71RS6 500 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 HAUS6Q7Z4H7 955 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 SP7Q8TDD2 431 aaPredicted RBP15.14■□□□□ 0.01
SERF1B-204ENST00000506542 SPIRE2Q8WWL2 714 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 TCP11Q8WWU5 503 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 ZNF689Q96CS4 500 aaPredicted RBP15.14■□□□□ 0.01
SERF1B-204ENST00000506542 RNF19AQ9NV58 838 aa15.14■□□□□ 0.01
SERF1B-204ENST00000506542 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.14■□□□□ 0.01
SERF1B-204ENST00000506542 ADGRA3Q8IWK6 1321 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 LRRIQ4A6NIV6 560 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 INO80B-WBP1J3KQ70 363 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 CETN3O15182 167 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 LPXNO60711 386 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 GNA14O95837 355 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 NR3C1P04150 777 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 EDN1P05305 212 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 TPM2P07951 284 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 ATF7P17544 494 aaPredicted RBP15.13■□□□□ 0.01
SERF1B-204ENST00000506542 RPL13P26373 211 aaKnown RBP15.13■□□□□ 0.01
SERF1B-204ENST00000506542 HOXA11P31270 313 aaPredicted RBP15.13■□□□□ 0.01
SERF1B-204ENST00000506542 NPTX2P47972 431 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 SMTNP53814 917 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 MARSP56192 900 aaKnown RBP15.13■□□□□ 0.01
SERF1B-204ENST00000506542 ADAM9Q13443 819 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 PTPN21Q16825 1174 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 NPAS4Q8IUM7 802 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 MICALL1Q8N3F8 863 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 NTPCRQ9BSD7 190 aaKnown RBP15.13■□□□□ 0.01
SERF1B-204ENST00000506542 INO80BQ9C086 356 aaPredicted RBP15.13■□□□□ 0.01
SERF1B-204ENST00000506542 GBP3Q9H0R5 595 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 TMEM206Q9H813 350 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 LRFN2Q9ULH4 789 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 ZKSCAN5Q9Y2L8 839 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 MRPL42Q9Y6G3 142 aaKnown RBP15.13■□□□□ 0.01
SERF1B-204ENST00000506542 C5orf42Q9H799 3197 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 ITIH6Q6UXX5 1313 aa15.13■□□□□ 0.01
SERF1B-204ENST00000506542 SLC16A4O15374 487 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 ZSCAN20P17040 1043 aaPredicted RBP15.12■□□□□ 0.01
SERF1B-204ENST00000506542 SFPQP23246 707 aaKnown RBP eCLIP15.12■□□□□ 0.01
SERF1B-204ENST00000506542 PTENP60484 403 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 MBTD1Q05BQ5 628 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 TBX2Q13207 712 aaPredicted RBP15.12■□□□□ 0.01
SERF1B-204ENST00000506542 BTG3Q14201 252 aaPredicted RBP15.12■□□□□ 0.01
SERF1B-204ENST00000506542 MAN2A1Q16706 1144 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 MIIPQ5JXC2 388 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 TWF2Q6IBS0 349 aaKnown RBP15.12■□□□□ 0.01
SERF1B-204ENST00000506542 HS2ST1Q7LGA3 356 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 ZSCAN30Q86W11 494 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 ECHDC2Q86YB7 292 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 TMEM161BQ8NDZ6 487 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 HVCN1Q96D96 273 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 ZNF830Q96NB3 372 aaPredicted RBP15.12■□□□□ 0.01
SERF1B-204ENST00000506542 KCNF1Q9H3M0 494 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 KMT5AQ9NQR1 393 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 KCNG1Q9UIX4 513 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 STXBP5LQ9Y2K9 1186 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms