RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 LTB4R2Q9NPC1 389 aa11.01□□□□□ -0.65
NEDD9-210ENST00000505589 POLIQ9UNA4 740 aa11.01□□□□□ -0.65
NEDD9-210ENST00000505589 NID2Q14112 1375 aa11.01□□□□□ -0.65
NEDD9-210ENST00000505589 A0A1B0GUA9 196 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 CCDC194A0A1B0GVG4 234 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 TRAPPC3O43617 180 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 THP07101 528 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 C8AP07357 584 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 XRCC6P12956 609 aaKnown RBP eCLIP11□□□□□ -0.65
NEDD9-210ENST00000505589 NPEPPSP55786 919 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 ADCY1Q08828 1119 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 COL9A3Q14050 684 aaPredicted RBP11□□□□□ -0.65
NEDD9-210ENST00000505589 HSP90AA2PQ14568 343 aaPredicted RBP11□□□□□ -0.65
NEDD9-210ENST00000505589 EMC2Q15006 297 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 PLA2G4FQ68DD2 849 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 C1orf228Q6PIY5 440 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 PARM1Q6UWI2 310 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 RASEFQ8IZ41 740 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 DAGLBQ8NCG7 672 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 PIK3R5Q8WYR1 880 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 FGF13Q92913 245 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 CLDN23Q96B33 292 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 PRIMPOLQ96LW4 560 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 GPR62Q9BZJ7 368 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 MINDY3Q9H8M7 445 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 MIOSQ9NXC5 875 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 PARP2Q9UGN5 583 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 FBXW11Q9UKB1 542 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 USP18Q9UMW8 372 aa11□□□□□ -0.65
NEDD9-210ENST00000505589 MTCL1Q9Y4B5 1905 aaKnown RBP10.99□□□□□ -0.65
NEDD9-210ENST00000505589 TMEM150BA6NC51 233 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 ZNF197O14709 1029 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 EDIL3O43854 480 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 B4GALT3O60512 393 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 TSPAN1O60635 241 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 LILRB5O75023 590 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 ECI2O75521 394 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 TDP2O95551 362 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 MYBP10242 640 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 GLULP15104 373 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 CNR2P34972 360 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 EVCP57679 992 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 SPIRE1Q08AE8 756 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 TUSC3Q13454 348 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 FAM171A1Q5VUB5 890 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 APBB1IPQ7Z5R6 666 aaPredicted RBP10.99□□□□□ -0.65
NEDD9-210ENST00000505589 NEK8Q86SG6 692 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 CEP57Q86XR8 500 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 GLYCTKQ8IVS8 523 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 MAML2Q8IZL2 1156 aaPredicted RBP10.99□□□□□ -0.65
NEDD9-210ENST00000505589 NELL1Q92832 810 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 DNASE1L2Q92874 299 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 CHAMP1Q96JM3 812 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 ADPGKQ9BRR6 497 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 LXNQ9BS40 222 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 AGXT2Q9BYV1 514 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 ANKEF1Q9NU02 776 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 PRMT7Q9NVM4 692 aaPredicted RBP10.99□□□□□ -0.65
NEDD9-210ENST00000505589 SMG5Q9UPR3 1016 aaKnown RBP10.99□□□□□ -0.65
NEDD9-210ENST00000505589 WDR81Q562E7 1941 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 C2orf16Q68DN1 1984 aa10.99□□□□□ -0.65
NEDD9-210ENST00000505589 CACNA1AO00555 2505 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 CCNT1O60563 726 aaKnown RBP10.98□□□□□ -0.65
NEDD9-210ENST00000505589 CDKL5O76039 1030 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 PTPN2P17706 415 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 ARF4P18085 180 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-210ENST00000505589 RPS6KB1P23443 525 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 PDIA3P30101 505 aaKnown RBP10.98□□□□□ -0.65
NEDD9-210ENST00000505589 ELF1P32519 619 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 RAB33AQ14088 237 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 PSMD5Q16401 504 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 PABPC1LQ4VXU2 614 aaKnown RBP10.98□□□□□ -0.65
NEDD9-210ENST00000505589 AXDND1Q5T1B0 1012 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-210ENST00000505589 TPH2Q8IWU9 490 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 LNX1Q8TBB1 728 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-210ENST00000505589 NETO1Q8TDF5 533 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 KCNB2Q92953 911 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 IRF7Q92985 503 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 GJA10Q969M2 543 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 ZNF274Q96GC6 653 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-210ENST00000505589 CPB2Q96IY4 423 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 ZFP42Q96MM3 310 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 JAKMIP1Q96N16 626 aaKnown RBP10.98□□□□□ -0.65
NEDD9-210ENST00000505589 CLSTN3Q9BQT9 956 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 RPP25Q9BUL9 199 aaKnown RBP10.98□□□□□ -0.65
NEDD9-210ENST00000505589 APOL6Q9BWW8 343 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 EIF2AQ9BY44 585 aaKnown RBP10.98□□□□□ -0.65
NEDD9-210ENST00000505589 KCNMB3Q9NPA1 279 aa10.98□□□□□ -0.65
NEDD9-210ENST00000505589 AVENQ9NQS1 362 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-210ENST00000505589 MRPS23Q9Y3D9 190 aaKnown RBP10.98□□□□□ -0.65
NEDD9-210ENST00000505589 POTEMA6NI47 508 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 M0R2N6 131 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 EML1O00423 815 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 ADAMTS3O15072 1205 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 MICAL2O94851 1124 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 LYPLA2O95372 231 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 RETP07949 1114 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 ADRB1P08588 477 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 AKAP5P24588 427 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 CCR3P51677 355 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms