RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 RXFP1Q9HBX9 757 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 AGPAT5Q9NUQ2 364 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 ZDHHC7Q9NXF8 308 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 PCDHB2Q9Y5E7 798 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 TDRD15B5MCY1 1934 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 CNTNAP2Q9UHC6 1331 aa17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 CACNA1GO43497 2377 aa17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 GAS2O43903 313 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 TBC1D4O60343 1298 aa17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 ERLIN2O94905 339 aa17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 C1RP00736 705 aa17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 FDPSP14324 419 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 MLF2Q15773 248 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 AGMOQ6ZNB7 445 aa17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 TAS1R1Q7RTX1 841 aa17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 PALB2Q86YC2 1186 aa17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 NSUN7Q8NE18 718 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 ST13P5Q8NFI4 369 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 DDX23Q9BUQ8 820 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 PRKD2Q9BZL6 878 aa17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 GMEB2Q9UKD1 530 aa17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 PCDHA12Q9UN75 941 aa17.8■□□□□ 0.44
PDLIM7-213ENST00000505074 DOCK6Q96HP0 2047 aa17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 FAM170BA6NMN3 283 aa17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 ZBTB39O15060 712 aa17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 NEMFO60524 1076 aa17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 JAK2O60674 1132 aa17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 EIF5BO60841 1220 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 LILRB5O75023 590 aa17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 POMCP01189 267 aa17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 SLC44A4Q53GD3 710 aa17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 FERMT3Q86UX7 667 aa17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 DIS3L2Q8IYB7 885 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 EIF2AK1Q9BQI3 630 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 RPP25Q9BUL9 199 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 MINDY3Q9H8M7 445 aa17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 MARCH5Q9NX47 278 aa17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 PRG3Q9Y2Y8 225 aaPredicted RBP17.79■□□□□ 0.44
PDLIM7-213ENST00000505074 COL4A3Q01955 1670 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 BTBD18B2RXH4 712 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 ASAP2O43150 1006 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 ATP2B1P20020 1258 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 TGM1P22735 817 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 FSHRP23945 695 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 TXKP42681 527 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 OR1G1P47890 313 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 AFF1P51825 1210 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 DSG1Q02413 1049 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 SPIRE1Q08AE8 756 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 NCBP1Q09161 790 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 ZBTB41Q5SVQ8 909 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 PARM1Q6UWI2 310 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 RSPO2Q6UXX9 243 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 MTSS1LQ765P7 747 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 MRPL10Q7Z7H8 261 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 FGF14Q92915 247 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 TNFRSF25Q93038 417 aa17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 TTC12Q9H892 705 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 MTF2Q9Y483 593 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-213ENST00000505074 INO80B-WBP1J3KQ70 363 aa17.77■□□□□ 0.44
PDLIM7-213ENST00000505074 NCAM2O15394 837 aa17.77■□□□□ 0.44
PDLIM7-213ENST00000505074 TGM5O43548 720 aa17.77■□□□□ 0.44
PDLIM7-213ENST00000505074 PFKPQ01813 784 aa17.77■□□□□ 0.44
PDLIM7-213ENST00000505074 GUCY1B3Q02153 619 aa17.77■□□□□ 0.44
PDLIM7-213ENST00000505074 TFDP1Q14186 410 aa17.77■□□□□ 0.44
PDLIM7-213ENST00000505074 PPM1JQ5JR12 505 aa17.77■□□□□ 0.44
PDLIM7-213ENST00000505074 RNF168Q8IYW5 571 aaPredicted RBP17.77■□□□□ 0.44
PDLIM7-213ENST00000505074 NELL1Q92832 810 aa17.77■□□□□ 0.44
PDLIM7-213ENST00000505074 PARD6AQ9NPB6 346 aa17.77■□□□□ 0.44
PDLIM7-213ENST00000505074 LTB4R2Q9NPC1 389 aa17.77■□□□□ 0.44
PDLIM7-213ENST00000505074 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.77■□□□□ 0.44
PDLIM7-213ENST00000505074 CDH7Q9ULB5 785 aa17.77■□□□□ 0.44
PDLIM7-213ENST00000505074 ZFHX4Q86UP3 3567 aa17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 NR1I2O75469 434 aa17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 SLITRK3O94933 977 aa17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 ITGA4P13612 1032 aa17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 MXD4Q14582 209 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 SAFBQ15424 915 aaKnown RBP eCLIP17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 COLGALT2Q8IYK4 626 aa17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 CPB2Q96IY4 423 aa17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 NELL2Q99435 816 aa17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 APOL6Q9BWW8 343 aa17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 FAM126AQ9BYI3 521 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 TRIM6Q9C030 488 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 UBN1Q9NPG3 1134 aa17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 RAB23Q9ULC3 237 aa17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 RALGAPA1Q6GYQ0 2036 aa17.76■□□□□ 0.43
PDLIM7-213ENST00000505074 ZMYND10O75800 440 aa17.75■□□□□ 0.43
PDLIM7-213ENST00000505074 DGAT1O75907 488 aa17.75■□□□□ 0.43
PDLIM7-213ENST00000505074 EFEMP2O95967 443 aa17.75■□□□□ 0.43
PDLIM7-213ENST00000505074 MCM7P33993 719 aa17.75■□□□□ 0.43
PDLIM7-213ENST00000505074 ERICH6BQ5W0A0 696 aa17.75■□□□□ 0.43
PDLIM7-213ENST00000505074 NOTUMQ6P988 496 aa17.75■□□□□ 0.43
PDLIM7-213ENST00000505074 LILRA6Q6PI73 481 aa17.75■□□□□ 0.43
PDLIM7-213ENST00000505074 TSSK4Q6SA08 328 aa17.75■□□□□ 0.43
PDLIM7-213ENST00000505074 GRASPQ7Z6J2 395 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-213ENST00000505074 GLYCTKQ8IVS8 523 aa17.75■□□□□ 0.43
PDLIM7-213ENST00000505074 CNNM3Q8NE01 707 aa17.75■□□□□ 0.43
PDLIM7-213ENST00000505074 NETO1Q8TDF5 533 aa17.75■□□□□ 0.43
PDLIM7-213ENST00000505074 PIGOQ8TEQ8 1089 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms