RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 PDCD2LQ9BRP1 358 aa4.14□□□□□ -1.75
RFC1-209ENST00000504974 MEGF9Q9H1U4 602 aa4.14□□□□□ -1.75
RFC1-209ENST00000504974 TDP1Q9NUW8 608 aa4.14□□□□□ -1.75
RFC1-209ENST00000504974 GOLGA6AQ9NYA3 693 aa4.14□□□□□ -1.75
RFC1-209ENST00000504974 IPPQ9Y573 584 aa4.14□□□□□ -1.75
RFC1-209ENST00000504974 MATN2O00339 956 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 MATN3O15232 486 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 POU2F2P09086 479 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 U2AF1L5P0DN76 240 aaPredicted RBP4.13□□□□□ -1.75
RFC1-209ENST00000504974 EDNRBP24530 442 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 AKAP5P24588 427 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 U2AF1Q01081 240 aaKnown RBP eCLIP4.13□□□□□ -1.75
RFC1-209ENST00000504974 SURF1Q15526 300 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 FAM214AQ32MH5 1076 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 PGS1Q32NB8 556 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 GFOD2Q3B7J2 385 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 MINDY4Q4G0A6 757 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 GAGE13Q4V321 117 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 C19orf54Q5BKX5 351 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 PRAMEF14Q5SWL7 426 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 NXNQ6DKJ4 435 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 USP45Q70EL2 814 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 EPM2AIP1Q7L775 607 aaPredicted RBP4.13□□□□□ -1.75
RFC1-209ENST00000504974 DRC7Q8IY82 874 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 GPR135Q8IZ08 494 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 OR7D4Q8NG98 312 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.13□□□□□ -1.75
RFC1-209ENST00000504974 TTC8Q8TAM2 541 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 SH3RF3Q8TEJ3 882 aaPredicted RBP4.13□□□□□ -1.75
RFC1-209ENST00000504974 MVB12AQ96EY5 273 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 TMX3Q96JJ7 454 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 TCF25Q9BQ70 676 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 PLA2G12BQ9BX93 195 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 MANSC1Q9H8J5 431 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 LANCL2Q9NS86 450 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 TRPS1Q9UHF7 1281 aa4.13□□□□□ -1.75
RFC1-209ENST00000504974 AJAP1Q9UKB5 411 aaPredicted RBP4.13□□□□□ -1.75
RFC1-209ENST00000504974 RUVBL1Q9Y265 456 aaKnown RBP4.13□□□□□ -1.75
RFC1-209ENST00000504974 MTSS1O43312 755 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 FOXS1O43638 330 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 CTNND1O60716 968 aaKnown RBP4.12□□□□□ -1.75
RFC1-209ENST00000504974 RPLP2P05387 115 aaKnown RBP4.12□□□□□ -1.75
RFC1-209ENST00000504974 RAP2AP10114 183 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 TNFRSF1AP19438 455 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 LPOP22079 712 aaPredicted RBP4.12□□□□□ -1.75
RFC1-209ENST00000504974 CRHR1P34998 444 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 SREBF1P36956 1147 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 SLC6A9P48067 706 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 EPHB4P54760 987 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 APBA1Q02410 837 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 GTF2H3Q13889 308 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 GJC2Q5T442 439 aaPredicted RBP4.12□□□□□ -1.75
RFC1-209ENST00000504974 SLFN13Q68D06 897 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 PPP4R3AQ6IN85 833 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 PPP4R4Q6NUP7 873 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 SLC4A10Q6U841 1118 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 PDZD4Q76G19 769 aaPredicted RBP4.12□□□□□ -1.75
RFC1-209ENST00000504974 ADGRE4PQ86SQ3 457 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 TRMT2AQ8IZ69 625 aaKnown RBP4.12□□□□□ -1.75
RFC1-209ENST00000504974 HOXB13Q92826 284 aaPredicted RBP4.12□□□□□ -1.75
RFC1-209ENST00000504974 HPS3Q969F9 1004 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 IL17RAQ96F46 866 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 CLPTM1LQ96KA5 538 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 AIFM3Q96NN9 605 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 SAMD11Q96NU1 681 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 TMPRSS5Q9H3S3 457 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 AGO3Q9H9G7 860 aaKnown RBP4.12□□□□□ -1.75
RFC1-209ENST00000504974 SEC61A2Q9H9S3 476 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 BCO1Q9HAY6 547 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 CD248Q9HCU0 757 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 TMEM140Q9NV12 185 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 SIK3Q9Y2K2 1263 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 MYBBP1AQ9BQG0 1328 aaKnown RBP4.12□□□□□ -1.75
RFC1-209ENST00000504974 ZMYM3Q14202 1370 aa4.12□□□□□ -1.75
RFC1-209ENST00000504974 NCAPD3P42695 1498 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 SMARCA2P51531 1590 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 LRRC14BA6NHZ5 514 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 GPR32O75388 356 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 STC2O76061 302 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 GASTP01350 101 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 FTLP02792 175 aaPredicted RBP4.11□□□□□ -1.75
RFC1-209ENST00000504974 FPR1P21462 350 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 WASP42768 502 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 GZMKP49863 264 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 ADAM8P78325 824 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 GRM7Q14831 915 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 ATAT1Q5SQI0 421 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 FAM111BQ6SJ93 734 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 GADL1Q6ZQY3 521 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 TTC7BQ86TV6 843 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 CIR1Q86X95 450 aaPredicted RBP4.11□□□□□ -1.75
RFC1-209ENST00000504974 ZGPATQ8N5A5 531 aaKnown RBP4.11□□□□□ -1.75
RFC1-209ENST00000504974 LILRA3Q8N6C8 439 aaPredicted RBP4.11□□□□□ -1.75
RFC1-209ENST00000504974 ZBTB34Q8NCN2 500 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 PPP1R35Q8TAP8 253 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 SLC35G2Q8TBE7 412 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 DIS3LQ8TF46 1054 aaKnown RBP4.11□□□□□ -1.75
RFC1-209ENST00000504974 RGMAQ96B86 450 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 CEP95Q96GE4 821 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 TAAR9Q96RI9 348 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms