RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 MRPL44Q9H9J2 332 aaKnown RBP6.51□□□□□ -1.37
SPOP-208ENST00000504889 MRPL17Q9NRX2 175 aaKnown RBP6.51□□□□□ -1.37
SPOP-208ENST00000504889 CD207Q9UJ71 328 aa6.51□□□□□ -1.37
SPOP-208ENST00000504889 BARX2Q9UMQ3 279 aaPredicted RBP6.51□□□□□ -1.37
SPOP-208ENST00000504889 TNFSF13BQ9Y275 285 aa6.51□□□□□ -1.37
SPOP-208ENST00000504889 SSX2IPQ9Y2D8 614 aa6.51□□□□□ -1.37
SPOP-208ENST00000504889 ATP6V1DQ9Y5K8 247 aa6.51□□□□□ -1.37
SPOP-208ENST00000504889 REV3LO60673 3130 aa6.51□□□□□ -1.37
SPOP-208ENST00000504889 TTLL13PA6NNM8 815 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 HIDE1A8MVS5 230 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 TNFRSF10AO00220 468 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 CUTAO60888 179 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 PPP6R2O75170 966 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 TOM1L1O75674 476 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 GCNT3O95395 438 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 EDN1P05305 212 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 MCF2P10911 925 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 IL9P15248 144 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 NASPP49321 788 aaPredicted RBP6.5□□□□□ -1.37
SPOP-208ENST00000504889 GLUD2P49448 558 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 KRT85P78386 507 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 AMPD3Q01432 767 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 DNM1Q05193 864 aaKnown RBP6.5□□□□□ -1.37
SPOP-208ENST00000504889 PPP2R3AQ06190 1150 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 MAPK7Q13164 816 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 TUSC3Q13454 348 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 PKP1Q13835 747 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 CAMK1Q14012 370 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 HSP90AA2PQ14568 343 aaPredicted RBP6.5□□□□□ -1.37
SPOP-208ENST00000504889 NOLC1Q14978 699 aaKnown RBP eCLIP6.5□□□□□ -1.37
SPOP-208ENST00000504889 DUSP6Q16828 381 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 LEXMQ3ZCV2 418 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 SEZ6Q53EL9 994 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 ARSHQ5FYA8 562 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 HERC4Q5GLZ8 1057 aaPredicted RBP6.5□□□□□ -1.37
SPOP-208ENST00000504889 NT5DC1Q5TFE4 455 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 CES5AQ6NT32 575 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 USP49Q70CQ1 688 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 DDX53Q86TM3 631 aaKnown RBP6.5□□□□□ -1.37
SPOP-208ENST00000504889 TMEM173Q86WV6 379 aaPredicted RBP6.5□□□□□ -1.37
SPOP-208ENST00000504889 GLYCTKQ8IVS8 523 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 CEP57L1Q8IYX8 460 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 SYCP3Q8IZU3 236 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 EFHBQ8N7U6 833 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 CEP120Q8N960 986 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 LINC00301Q8NCQ3 95 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 SPIRE2Q8WWL2 714 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 DDX12PQ92771 950 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 STAMQ92783 540 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 CASP10Q92851 521 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 DHX58Q96C10 678 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 SPATA32Q96LK8 384 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 ACAP3Q96P50 834 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 NECAB3Q96P71 396 aaPredicted RBP6.5□□□□□ -1.37
SPOP-208ENST00000504889 ACO2Q99798 780 aaKnown RBP6.5□□□□□ -1.37
SPOP-208ENST00000504889 CDT1Q9H211 546 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 TSHZ2Q9NRE2 1034 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 TBC1D7Q9P0N9 293 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 ARHGAP28Q9P2N2 729 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 ADAM28Q9UKQ2 775 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 NUB1Q9Y5A7 615 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 MYH15Q9Y2K3 1946 aa6.5□□□□□ -1.37
SPOP-208ENST00000504889 SF3B1O75533 1304 aaKnown RBP eCLIP6.5□□□□□ -1.37
SPOP-208ENST00000504889 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.49□□□□□ -1.37
SPOP-208ENST00000504889 GOLGA6L4A6NEF3 574 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 C2orf71A6NGG8 1288 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 TRAPPC3O43617 180 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 TBX10O75333 385 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 B3GAT3O94766 335 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 CLSTN1O94985 981 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 SOD2P04179 222 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 ADH1AP07327 375 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 MYBP10242 640 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 CTSAP10619 480 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 MAPTP10636 758 aaKnown RBP6.49□□□□□ -1.37
SPOP-208ENST00000504889 GAP43P17677 238 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 SCP2P22307 547 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 SP100P23497 879 aaPredicted RBP6.49□□□□□ -1.37
SPOP-208ENST00000504889 NMT1P30419 496 aaKnown RBP6.49□□□□□ -1.37
SPOP-208ENST00000504889 GRM5P41594 1212 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 NCKAP1LP55160 1127 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 ASIC1P78348 528 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 DLX2Q07687 328 aaPredicted RBP6.49□□□□□ -1.37
SPOP-208ENST00000504889 ADAM15Q13444 863 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 SMAD4Q13485 552 aaKnown RBP6.49□□□□□ -1.37
SPOP-208ENST00000504889 USP41Q3LFD5 358 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 ATL3Q6DD88 541 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 ADALQ6DHV7 355 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 FUT10Q6P4F1 479 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 ZPBP2Q6X784 338 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 STXBP4Q6ZWJ1 553 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 PPFIBP1Q86W92 1011 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 SFR1Q86XK3 245 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 CCDC65Q8IXS2 484 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 COLGALT2Q8IYK4 626 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 MRPL43Q8N983 215 aaKnown RBP6.49□□□□□ -1.37
SPOP-208ENST00000504889 IQUBQ8NA54 791 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 TMEM161BQ8NDZ6 487 aa6.49□□□□□ -1.37
SPOP-208ENST00000504889 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.49□□□□□ -1.37
SPOP-208ENST00000504889 BCL7CQ8WUZ0 217 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms