RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 AP5M1Q9H0R1 490 aa8.84□□□□□ -0.99
UBE2B-204ENST00000504431 TRIM39Q9HCM9 518 aa8.84□□□□□ -0.99
UBE2B-204ENST00000504431 SLC4A4Q9Y6R1 1079 aa8.84□□□□□ -0.99
UBE2B-204ENST00000504431 SIPA1L1O43166 1804 aa8.84□□□□□ -0.99
UBE2B-204ENST00000504431 A0A0D9SFI3 127 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 ARVCFO00192 962 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 HRKO00198 91 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 MAFKO60675 156 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 NPTXRO95502 500 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 EFEMP2O95967 443 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 ASLP04424 464 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 DBHP09172 617 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 GLI4P10075 376 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 TAL1P17542 331 aaPredicted RBP8.83□□□□□ -1
UBE2B-204ENST00000504431 IGFALSP35858 605 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 SLC6A11P48066 632 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 JAG1P78504 1218 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 CBX2Q14781 532 aaPredicted RBP8.83□□□□□ -1
UBE2B-204ENST00000504431 TKFCQ3LXA3 575 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 TTC22Q5TAA0 569 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 EGFLAMQ63HQ2 1017 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 ZSCAN25Q6NSZ9 544 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 CENPQQ7L2Z9 268 aaPredicted RBP8.83□□□□□ -1
UBE2B-204ENST00000504431 ZC3H7AQ8IWR0 971 aaKnown RBP8.83□□□□□ -1
UBE2B-204ENST00000504431 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.83□□□□□ -1
UBE2B-204ENST00000504431 MFSD3Q96ES6 412 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 DYNLL2Q96FJ2 89 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 PEX11GQ96HA9 241 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 STRBPQ96SI9 672 aaKnown RBP8.83□□□□□ -1
UBE2B-204ENST00000504431 ZNF341Q9BYN7 854 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 CRNKL1Q9BZJ0 848 aaKnown RBP8.83□□□□□ -1
UBE2B-204ENST00000504431 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.83□□□□□ -1
UBE2B-204ENST00000504431 DCP1AQ9NPI6 582 aaPredicted RBP8.83□□□□□ -1
UBE2B-204ENST00000504431 MCM9Q9NXL9 1143 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 DBR1Q9UK59 544 aaKnown RBP8.83□□□□□ -1
UBE2B-204ENST00000504431 NUB1Q9Y5A7 615 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 NAV1Q8NEY1 1877 aa8.83□□□□□ -1
UBE2B-204ENST00000504431 CEP350Q5VT06 3117 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 GPAA1O43292 621 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 PPP1R11O60927 126 aaPredicted RBP8.82□□□□□ -1
UBE2B-204ENST00000504431 SDSP20132 328 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 GALK1P51570 392 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 FKBP1BP68106 108 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 SPIRE1Q08AE8 756 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 VPS53Q5VIR6 699 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 CWC27Q6UX04 472 aaKnown RBP8.82□□□□□ -1
UBE2B-204ENST00000504431 ANKRD13AQ8IZ07 590 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 SLC44A5Q8NCS7 719 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 SEC14L1Q92503 715 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 OPTNQ96CV9 577 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 DNAJC18Q9H819 358 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 FBXL7Q9UJT9 491 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 PRKAB1Q9Y478 270 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 PCDHA9Q9Y5H5 950 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 PCDHA8Q9Y5H6 950 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 ATRNL1Q5VV63 1379 aa8.82□□□□□ -1
UBE2B-204ENST00000504431 GSG1L2A8MUP6 293 aa8.81□□□□□ -1
UBE2B-204ENST00000504431 KRIT1O00522 736 aa8.81□□□□□ -1
UBE2B-204ENST00000504431 WNT9AO14904 365 aa8.81□□□□□ -1
UBE2B-204ENST00000504431 NTRK1P04629 796 aa8.81□□□□□ -1
UBE2B-204ENST00000504431 ECE1P42892 770 aa8.81□□□□□ -1
UBE2B-204ENST00000504431 RAB3GAP1Q15042 981 aa8.81□□□□□ -1
UBE2B-204ENST00000504431 ZNF589Q86UQ0 364 aaPredicted RBP8.81□□□□□ -1
UBE2B-204ENST00000504431 FBXW5Q969U6 566 aa8.81□□□□□ -1
UBE2B-204ENST00000504431 WNK4Q96J92 1243 aa8.81□□□□□ -1
UBE2B-204ENST00000504431 CLUHP3Q96NS8 147 aa8.81□□□□□ -1
UBE2B-204ENST00000504431 IL25Q9H293 177 aa8.81□□□□□ -1
UBE2B-204ENST00000504431 EPB41L4AQ9HCS5 686 aaPredicted RBP8.81□□□□□ -1
UBE2B-204ENST00000504431 INCENPQ9NQS7 918 aa8.81□□□□□ -1
UBE2B-204ENST00000504431 PI4KBQ9UBF8 816 aa8.81□□□□□ -1
UBE2B-204ENST00000504431 FOXP2O15409 715 aa8.8□□□□□ -1
UBE2B-204ENST00000504431 OPA1O60313 960 aa8.8□□□□□ -1
UBE2B-204ENST00000504431 ZFYP08048 801 aaPredicted RBP8.8□□□□□ -1
UBE2B-204ENST00000504431 GNAT1P11488 350 aa8.8□□□□□ -1
UBE2B-204ENST00000504431 SLC9A5Q14940 896 aa8.8□□□□□ -1
UBE2B-204ENST00000504431 CTR9Q6PD62 1173 aa8.8□□□□□ -1
UBE2B-204ENST00000504431 DDX53Q86TM3 631 aaKnown RBP8.8□□□□□ -1
UBE2B-204ENST00000504431 IPPKQ9H8X2 491 aa8.8□□□□□ -1
UBE2B-204ENST00000504431 ZNF112Q9UJU3 913 aa8.8□□□□□ -1
UBE2B-204ENST00000504431 ZHX2Q9Y6X8 837 aa8.8□□□□□ -1
UBE2B-204ENST00000504431 RPAP1Q9BWH6 1393 aaPredicted RBP8.8□□□□□ -1
UBE2B-204ENST00000504431 ATAD5Q96QE3 1844 aa8.8□□□□□ -1
UBE2B-204ENST00000504431 TCRBV16S1A1N1A0A5B0 115 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 NUDT19A8MXV4 375 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 PRDM1O75626 825 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 RASGRP1O95267 797 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 HLA-DOAP06340 250 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 HSPA1AP0DMV8 641 aaKnown RBP8.79□□□□□ -1
UBE2B-204ENST00000504431 HSPA1BP0DMV9 641 aaKnown RBP8.79□□□□□ -1
UBE2B-204ENST00000504431 SHMT1P34896 483 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 TDO2P48775 406 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 MAPKAPK2P49137 400 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 GYS2P54840 703 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 NOGQ13253 232 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 MCMDC2Q4G0Z9 681 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 MCTP1Q6DN14 999 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 UBE2R2Q712K3 238 aaPredicted RBP8.79□□□□□ -1
UBE2B-204ENST00000504431 FGD2Q7Z6J4 655 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 FOXP4Q8IVH2 680 aaPredicted RBP8.79□□□□□ -1
UBE2B-204ENST00000504431 HOOK2Q96ED9 719 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms