RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 ZNF268Q14587 947 aaPredicted RBP16.04■□□□□ 0.16
SNF8-203ENST00000504000 RRP1BQ14684 758 aaKnown RBP16.04■□□□□ 0.16
SNF8-203ENST00000504000 TNIP1Q15025 636 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 GALNTL6Q49A17 601 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 KRT39Q6A163 491 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 CC2D2BQ6DHV5 1058 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 ACAD10Q6JQN1 1059 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 SLC30A10Q6XR72 485 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 RNF207Q6ZRF8 634 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNF8-203ENST00000504000 ENOSF1Q7L5Y1 443 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 MIER3Q7Z3K6 550 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 HAUS6Q7Z4H7 955 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 RELL1Q8IUW5 271 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 ELAC2Q9BQ52 826 aaKnown RBP16.04■□□□□ 0.16
SNF8-203ENST00000504000 CDC42EP4Q9H3Q1 356 aaKnown RBP16.04■□□□□ 0.16
SNF8-203ENST00000504000 DBNDD1Q9H9R9 158 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 ATP6V0A4Q9HBG4 840 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 AVENQ9NQS1 362 aaPredicted RBP16.04■□□□□ 0.16
SNF8-203ENST00000504000 AAASQ9NRG9 546 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 A0A1B0GUA9 196 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 TMEM110-MUSTN1A8MSY1 372 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 SLC1A1P43005 524 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 PTP4A2Q12974 167 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 PPP1R7Q15435 360 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 GIMAP7Q8NHV1 300 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 PLEKHO2Q8TD55 490 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 TMC2Q8TDI7 906 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 DDX1Q92499 740 aaKnown RBP16.03■□□□□ 0.16
SNF8-203ENST00000504000 ARHGEF2Q92974 986 aaKnown RBP16.03■□□□□ 0.16
SNF8-203ENST00000504000 ZNF653Q96CK0 615 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 SNF8Q96H20 258 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 PCIF1Q9H4Z3 704 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 TMEM8AQ9HCN3 771 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 EXOC7Q9UPT5 735 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 USP15Q9Y4E8 981 aaPredicted RBP16.03■□□□□ 0.16
SNF8-203ENST00000504000 ACTL7BQ9Y614 415 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 ZHX2Q9Y6X8 837 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 ANKRD63C9JTQ0 380 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 DHX15O43143 795 aaKnown RBP16.03■□□□□ 0.16
SNF8-203ENST00000504000 CYP26A1O43174 497 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 SUN1O94901 812 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 TTC4O95801 387 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 IVDP26440 423 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 NF2P35240 595 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 KCTD19Q17RG1 926 aaPredicted RBP16.03■□□□□ 0.16
SNF8-203ENST00000504000 SGO2Q562F6 1265 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 ZNF746Q6NUN9 644 aaPredicted RBP16.03■□□□□ 0.16
SNF8-203ENST00000504000 HIBCHQ6NVY1 386 aaPredicted RBP16.03■□□□□ 0.16
SNF8-203ENST00000504000 USP37Q86T82 979 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 SLC47A2Q86VL8 602 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 SPICE1Q8N0Z3 855 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 HELQQ8TDG4 1101 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 C7orf43Q8WVR3 580 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 CSRNP1Q96S65 589 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 LGALS13Q9UHV8 139 aa16.03■□□□□ 0.16
SNF8-203ENST00000504000 GRIN3BO60391 1043 aa16.02■□□□□ 0.16
SNF8-203ENST00000504000 MYBL1P10243 752 aa16.02■□□□□ 0.16
SNF8-203ENST00000504000 ALADP13716 330 aa16.02■□□□□ 0.16
SNF8-203ENST00000504000 QARSP47897 775 aaKnown RBP16.02■□□□□ 0.16
SNF8-203ENST00000504000 LMNB2Q03252 620 aa16.02■□□□□ 0.16
SNF8-203ENST00000504000 CEP128Q6ZU80 1094 aa16.02■□□□□ 0.16
SNF8-203ENST00000504000 PPM1KQ8N3J5 372 aa16.02■□□□□ 0.16
SNF8-203ENST00000504000 BBOF1Q8ND07 529 aa16.02■□□□□ 0.16
SNF8-203ENST00000504000 CKAP2Q8WWK9 683 aa16.02■□□□□ 0.16
SNF8-203ENST00000504000 KAT5Q92993 513 aa16.02■□□□□ 0.16
SNF8-203ENST00000504000 NOD2Q9HC29 1040 aa16.02■□□□□ 0.16
SNF8-203ENST00000504000 KCNH7Q9NS40 1196 aa16.02■□□□□ 0.16
SNF8-203ENST00000504000 FEM1BQ9UK73 627 aa16.02■□□□□ 0.16
SNF8-203ENST00000504000 SMCHD1A6NHR9 2005 aa16.02■□□□□ 0.15
SNF8-203ENST00000504000 SMIM23A6NLE4 172 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 ECE2O60344 883 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 SORBS3O60504 671 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 ZC3H11AO75152 810 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNF8-203ENST00000504000 GJB6O95452 261 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 GAS8O95995 478 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 ITGB5P18084 799 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 ELF1P32519 619 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 ECE1P42892 770 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 SLCO1A2P46721 670 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 PPARDQ03181 441 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 CENPCQ03188 943 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 KRT17Q04695 432 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 VSTM1Q6UX27 236 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 ZNF677Q86XU0 584 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 C4orf19Q8IY42 314 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 PARD3BQ8TEW8 1205 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 TRIM11Q96F44 468 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 FBXL18Q96ME1 805 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 TRAIPQ9BWF2 469 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 FOXP3Q9BZS1 431 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNF8-203ENST00000504000 TBC1D22BQ9NU19 505 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 PTPN22Q9Y2R2 807 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNF8-203ENST00000504000 TMEM120BA0PK00 339 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 KCNJ1P48048 391 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 GCNT1Q02742 428 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 SNRNP35Q16560 246 aaKnown RBP16.01■□□□□ 0.15
SNF8-203ENST00000504000 CLEC16AQ2KHT3 1053 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms