RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 KIF5BP33176 963 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 NOP2P46087 812 aaKnown RBP5.71□□□□□ -1.5
HTT-202ENST00000502820 OR1G1P47890 313 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 CXCL12P48061 93 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 PXNP49023 591 aaPredicted RBP5.71□□□□□ -1.5
HTT-202ENST00000502820 SLC11A1P49279 550 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 CCR3P51677 355 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 POLGP54098 1239 aaPredicted RBP5.71□□□□□ -1.5
HTT-202ENST00000502820 HNRNPH2P55795 449 aaKnown RBP5.71□□□□□ -1.5
HTT-202ENST00000502820 NLRP11P59045 1033 aaKnown RBP5.71□□□□□ -1.5
HTT-202ENST00000502820 FAM189BP81408 668 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 GRM2Q14416 872 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 STX1AQ16623 288 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 ZSCAN26Q16670 478 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 TWF2Q6IBS0 349 aaKnown RBP5.71□□□□□ -1.5
HTT-202ENST00000502820 TCEAL6Q6IPX3 200 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 USP17L6PQ6QN14 398 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 GLB1LQ6UWU2 654 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 TAS1R1Q7RTX1 841 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 CCDC186Q7Z3E2 898 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 SRLQ86TD4 932 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 LRRC8AQ8IWT6 810 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 EFCAB13Q8IY85 973 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 RASEFQ8IZ41 740 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 KIAA0319LQ8IZA0 1049 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 TMTC2Q8N394 836 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 SRBD1Q8N5C6 995 aaKnown RBP5.71□□□□□ -1.5
HTT-202ENST00000502820 CTCFLQ8NI51 663 aaPredicted RBP5.71□□□□□ -1.5
HTT-202ENST00000502820 NLRP7Q8WX94 980 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 UBXN4Q92575 508 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 KCNB2Q92953 911 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 TCEAL3Q969E4 200 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 B3GALT6Q96L58 329 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 CEP89Q96ST8 783 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 NELL2Q99435 816 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 BPIFA3Q9BQP9 254 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 LZTS2Q9BRK4 669 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 SDF4Q9BRK5 362 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 TNMDQ9H2S6 317 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 ADAMTS10Q9H324 1103 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 CLSTN2Q9H4D0 955 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 NRDE2Q9H7Z3 1164 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 JPH1Q9HDC5 661 aaPredicted RBP5.71□□□□□ -1.5
HTT-202ENST00000502820 RNF19AQ9NV58 838 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 RBM28Q9NW13 759 aaKnown RBP5.71□□□□□ -1.5
HTT-202ENST00000502820 TCEAL9Q9UHQ7 104 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 FAN1Q9Y2M0 1017 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 CHD6Q8TD26 2715 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 ATXN2Q99700 1313 aaKnown RBP5.71□□□□□ -1.5
HTT-202ENST00000502820 PLXNA4Q9HCM2 1894 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 COL4A3Q01955 1670 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 CCDC151A5D8V7 595 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 ANHXE9PGG2 379 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 MEIS2O14770 477 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 CCL16O15467 120 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 TEX28O15482 410 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 ZSCAN12O43309 604 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 ERLIN1O75477 346 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 PLEKHA8P1O95397 391 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 POMCP01189 267 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 CALM1P0DP23 149 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 CALM2P0DP24 149 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 CALM3P0DP25 149 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 KCNA2P16389 499 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 RPL17P18621 184 aaKnown RBP5.7□□□□□ -1.5
HTT-202ENST00000502820 MCM3P25205 808 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 ACTN2P35609 894 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 GNAQP50148 359 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 CLCN3P51790 818 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 EXOSC10Q01780 885 aaKnown RBP5.7□□□□□ -1.5
HTT-202ENST00000502820 FUT2Q10981 343 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 BRD3Q15059 726 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 ADCK5Q3MIX3 580 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 TTC31Q49AM3 519 aaPredicted RBP5.7□□□□□ -1.5
HTT-202ENST00000502820 NOMO2Q5JPE7 1267 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 DAB2IPQ5VWQ8 1189 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 PDXDC2PQ6P474 469 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 APOA5Q6Q788 366 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 TMTC3Q6ZXV5 915 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 MTSS1LQ765P7 747 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 ZNF280BQ86YH2 543 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 CCAR2Q8N163 923 aaKnown RBP5.7□□□□□ -1.5
HTT-202ENST00000502820 LRRC71Q8N4P6 559 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 TTC8Q8TAM2 541 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 URGCPQ8TCY9 931 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 FAM3CQ92520 227 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 FGF13Q92913 245 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 MCRS1Q96EZ8 462 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 CDHR1Q96JP9 859 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 PCYT2Q99447 389 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 SENP7Q9BQF6 1050 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 EDEM2Q9BV94 578 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 LSM14BQ9BX40 385 aaKnown RBP5.7□□□□□ -1.5
HTT-202ENST00000502820 LRRC2Q9BYS8 371 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 NT5C3AQ9H0P0 336 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 ZSCAN16Q9H4T2 348 aaPredicted RBP5.7□□□□□ -1.5
HTT-202ENST00000502820 MED4Q9NPJ6 270 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 PRMT8Q9NR22 394 aaPredicted RBP5.7□□□□□ -1.5
HTT-202ENST00000502820 TBC1D13Q9NVG8 400 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 SLC9A2Q9UBY0 812 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms