RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 TTLL6Q8N841 843 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 WHAMMQ8TF30 809 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 SCG3Q8WXD2 468 aaKnown RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 COA7Q96BR5 231 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 C8orf48Q96LL4 319 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 RTFDC1Q9BY42 306 aaPredicted RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 TRIM31Q9BZY9 425 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 PCDH18Q9HCL0 1135 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 GDAQ9Y2T3 454 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 WASF2Q9Y6W5 498 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 KRT36O76013 467 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 ITGA4P13612 1032 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 HOXA10P31260 410 aaPredicted RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 CRKP46108 304 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 HPCAP84074 193 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 TROAPQ12815 778 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 TNIP1Q15025 636 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 KRT71Q3SY84 523 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 TTC38Q5R3I4 469 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 DSTYKQ6XUX3 929 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 OTUD6AQ7L8S5 288 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 SATL1Q86VE3 508 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 ZFPM1Q8IX07 1006 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 OGFOD1Q8N543 542 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 SMC1BQ8NDV3 1235 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 HELQQ8TDG4 1101 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 MPP4Q96JB8 637 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 NUP85Q9BW27 656 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 CTNNAL1Q9UBT7 734 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 MRPS23Q9Y3D9 190 aaKnown RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 MYH3P11055 1940 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 TNS1Q9HBL0 1735 aaKnown RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 MYOCOSA0A1B0GUC4 107 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 HTR3EA5X5Y0 456 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 USP17L5A8MUK1 530 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 SCAMP3O14828 347 aaKnown RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 CETN3O15182 167 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 DAPK3O43293 454 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 CBX6O95503 412 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 GSTA1P08263 222 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 PTGDRQ13258 359 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 DYNC1I2Q13409 638 aaKnown RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 CAMK2BQ13554 666 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 RILPL1Q5EBL4 403 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 SYDE2Q5VT97 1194 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 TMTC3Q6ZXV5 915 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 WDR60Q8WVS4 1066 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 NCSTNQ92542 709 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 ABHD8Q96I13 439 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 PIGSQ96S52 555 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 SIKE1Q9BRV8 207 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 RNF26Q9BY78 433 aaPredicted RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 CSRNP2Q9H175 543 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 NMRK2Q9NPI5 230 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 IL17RBQ9NRM6 502 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 CYP39A1Q9NYL5 469 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 SERPINB13Q9UIV8 391 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 DBR1Q9UK59 544 aaKnown RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 ITM2BQ9Y287 266 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 NR2E1Q9Y466 385 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 SBF2Q86WG5 1849 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 ECM29Q5VYK3 1845 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 CFAP73A6NFT4 308 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 A6NL46 340 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 RNASEH1O60930 286 aaKnown RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 FLOT1O75955 427 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TUFMP49411 452 aaKnown RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 IFI16Q16666 785 aaKnown RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 MUM1Q2TAK8 710 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 CRY2Q49AN0 593 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TYW1BQ6NUM6 668 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 CDC42EP5Q6NZY7 148 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 ZNF572Q7Z3I7 529 aaPredicted RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 LMNTD2Q8IXW0 634 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 CHPFQ8IZ52 775 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 MREGQ8N565 214 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 DEPTORQ8TB45 409 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 HIC2Q96JB3 615 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 ANKRD27Q96NW4 1050 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 IWS1Q96ST2 819 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 APBA2Q99767 749 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TMUB1Q9BVT8 246 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 PLVAPQ9BX97 442 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 ARMC7Q9H6L4 198 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 C12orf49Q9H741 205 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 DDX4Q9NQI0 724 aaKnown RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 KRT82Q9NSB4 513 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 MRGBPQ9NV56 204 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 ZNHIT6Q9NWK9 470 aaKnown RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 ARHGAP20Q9P2F6 1191 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 FBXO2Q9UK22 296 aaPredicted RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TMCO1Q9UM00 188 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 R3HDM2Q9Y2K5 976 aaKnown RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 CHD4Q14839 1912 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 WDR19Q8NEZ3 1342 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 BAZ2AQ9UIF9 1905 aaKnown RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 FAM237AA0A1B0GTK4 181 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 GOLGA6L10A6NI86 522 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TCP11X1B4DZS4 312 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TBX3O15119 743 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms