RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 HEBP1Q9NRV9 189 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC171-209ENST00000498725 FNIP2Q9P278 1114 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 WRAP73Q9P2S5 460 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-209ENST00000498725 GMEB2Q9UKD1 530 aa10.17□□□□□ -0.78
CCDC171-209ENST00000498725 ZFP37Q9Y6Q3 630 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-209ENST00000498725 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.16□□□□□ -0.78
CCDC171-209ENST00000498725 CASTOR2A6NHX0 329 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 ZBTB39O15060 712 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 ADAM12O43184 909 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 C8AP07357 584 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 C7P10643 843 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 QARSP47897 775 aaKnown RBP10.16□□□□□ -0.78
CCDC171-209ENST00000498725 EMC2Q15006 297 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 PSMD5Q16401 504 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 Q4G0T1 1027 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 FAM171A1Q5VUB5 890 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 NOTUMQ6P988 496 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 PRR23BQ6ZRT6 265 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 FERMT3Q86UX7 667 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 ZBTB44Q8NCP5 570 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 SLC7A14Q8TBB6 771 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 ETNPPLQ8TBG4 499 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 DDX23Q9BUQ8 820 aaKnown RBP10.16□□□□□ -0.78
CCDC171-209ENST00000498725 PLA2G2FQ9BZM2 168 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 CSRNP2Q9H175 543 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 EPC1Q9H2F5 836 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 DDX25Q9UHL0 483 aaKnown RBP10.16□□□□□ -0.78
CCDC171-209ENST00000498725 FBXW11Q9UKB1 542 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 RAB23Q9ULC3 237 aa10.16□□□□□ -0.78
CCDC171-209ENST00000498725 NCAM2O15394 837 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 B4GALT5O43286 388 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 SLC37A4O43826 429 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 TBC1D4O60343 1298 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 XYLBO75191 536 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 ADRB1P08588 477 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 RFC5P40937 340 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 PFKPQ01813 784 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 CREMQ03060 361 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 NCBP1Q09161 790 aaKnown RBP10.15□□□□□ -0.78
CCDC171-209ENST00000498725 MTAPQ13126 283 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 HSP90AA2PQ14568 343 aaPredicted RBP10.15□□□□□ -0.78
CCDC171-209ENST00000498725 INF2Q27J81 1249 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 NCAPH2Q6IBW4 605 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 B3GNT9Q6UX72 402 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 SKAP1Q86WV1 359 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 HACE1Q8IYU2 909 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 TCP11Q8WWU5 503 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 DYDC2Q96IM9 177 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 JAKMIP1Q96N16 626 aaKnown RBP10.15□□□□□ -0.78
CCDC171-209ENST00000498725 MBOAT7Q96N66 472 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 CLSTN3Q9BQT9 956 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 DHX33Q9H6R0 707 aaKnown RBP10.15□□□□□ -0.78
CCDC171-209ENST00000498725 RGL1Q9NZL6 768 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 DNMT3BQ9UBC3 853 aaKnown RBP10.15□□□□□ -0.78
CCDC171-209ENST00000498725 GIT1Q9Y2X7 761 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 TRIP11Q15643 1979 aa10.15□□□□□ -0.78
CCDC171-209ENST00000498725 SF3B1O75533 1304 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC171-209ENST00000498725 MARCH6O60337 910 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 LILRB5O75023 590 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 KIF4AO95239 1232 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 P4HBP07237 508 aaKnown RBP10.14□□□□□ -0.79
CCDC171-209ENST00000498725 HNRNPA1P09651 372 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC171-209ENST00000498725 ARF4P18085 180 aaPredicted RBP10.14□□□□□ -0.79
CCDC171-209ENST00000498725 TGM1P22735 817 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 AXLP30530 894 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 YWHABP31946 246 aaKnown RBP10.14□□□□□ -0.79
CCDC171-209ENST00000498725 OR1D2P34982 312 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 MAGEA9P43362 315 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 RCAN1P53805 252 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 CYP4A11Q02928 519 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 GRIK3Q13003 919 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 CTTNQ14247 550 aaKnown RBP10.14□□□□□ -0.79
CCDC171-209ENST00000498725 GRM2Q14416 872 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 KRT32Q14532 448 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 NTRK3Q16288 839 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 PABPC1LQ4VXU2 614 aaKnown RBP10.14□□□□□ -0.79
CCDC171-209ENST00000498725 AXDND1Q5T1B0 1012 aaPredicted RBP10.14□□□□□ -0.79
CCDC171-209ENST00000498725 ZNF852Q6ZMS4 543 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 NPAS3Q8IXF0 933 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 BLIDQ8IZY5 108 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 MTRQ99707 1265 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 LXNQ9BS40 222 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 TTPALQ9BTX7 342 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 RNF26Q9BY78 433 aaPredicted RBP10.14□□□□□ -0.79
CCDC171-209ENST00000498725 OSBPL6Q9BZF3 934 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 PCDHA4Q9UN74 947 aa10.14□□□□□ -0.79
CCDC171-209ENST00000498725 MRPS23Q9Y3D9 190 aaKnown RBP10.14□□□□□ -0.79
CCDC171-209ENST00000498725 KIF26AQ9ULI4 1882 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-209ENST00000498725 CYP3A7-CYP3A51PA0A087WV96 503 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 A0A087WWV3 80 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 ASAP2O43150 1006 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 GDF9O60383 454 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 DKC1O60832 514 aaKnown RBP eCLIP10.13□□□□□ -0.79
CCDC171-209ENST00000498725 PAPLNO95428 1278 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 HMGB1P09429 215 aaKnown RBP10.13□□□□□ -0.79
CCDC171-209ENST00000498725 CYP3A7P24462 503 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 PTENP60484 403 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 MBTD1Q05BQ5 628 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 SSRP1Q08945 709 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms