RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 KCNN1Q92952 543 aa14.49□□□□□ -0.09
ERCC3-209ENST00000494464 NTPCRQ9BSD7 190 aaKnown RBP14.49□□□□□ -0.09
ERCC3-209ENST00000494464 HERC2P3Q9BVR0 1158 aa14.49□□□□□ -0.09
ERCC3-209ENST00000494464 SNTG2Q9NY99 539 aa14.49□□□□□ -0.09
ERCC3-209ENST00000494464 ODF2LQ9ULJ1 636 aa14.49□□□□□ -0.09
ERCC3-209ENST00000494464 USP15Q9Y4E8 981 aaPredicted RBP14.49□□□□□ -0.09
ERCC3-209ENST00000494464 PTGESO14684 152 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 CLASP2O75122 1294 aaKnown RBP14.48□□□□□ -0.09
ERCC3-209ENST00000494464 SSBP05455 408 aaKnown RBP eCLIP14.48□□□□□ -0.09
ERCC3-209ENST00000494464 PLS3P13797 630 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 SSTR3P32745 418 aaPredicted RBP14.48□□□□□ -0.09
ERCC3-209ENST00000494464 CA8P35219 290 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 UBE2HP62256 183 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 DNM1Q05193 864 aaKnown RBP14.48□□□□□ -0.09
ERCC3-209ENST00000494464 GRIN1Q05586 938 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 AUTS2Q8WXX7 1259 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 PLIN2Q99541 437 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 ACO2Q99798 780 aaKnown RBP14.48□□□□□ -0.09
ERCC3-209ENST00000494464 MRPL4Q9BYD3 311 aaKnown RBP14.48□□□□□ -0.09
ERCC3-209ENST00000494464 CCSER1Q9C0I3 900 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 BLOC1S4Q9NUP1 217 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 DZANK1Q9NVP4 752 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 KLK14Q9P0G3 267 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 SSX2IPQ9Y2D8 614 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 USP20Q9Y2K6 914 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 CLIC4Q9Y696 253 aa14.48□□□□□ -0.09
ERCC3-209ENST00000494464 LILRB3O75022 631 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 URODP06132 367 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 PLCG1P19174 1290 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 TUSC3Q13454 348 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 KARSQ15046 597 aaKnown RBP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 TPRNQ4KMQ1 711 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 ATL3Q6DD88 541 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 LLGL2Q6P1M3 1020 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 SYCE2Q6PIF2 218 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 PPFIBP1Q86W92 1011 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 GPR65Q8IYL9 337 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 TMEM161BQ8NDZ6 487 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 LRRC15Q8TF66 581 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 KHSRPQ92945 711 aaKnown RBP eCLIP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 COLEC11Q9BWP8 271 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 C1QTNF1Q9BXJ1 281 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 SCAND2PQ9GZW5 306 aaPredicted RBP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 GZF1Q9H116 711 aaPredicted RBP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 CDT1Q9H211 546 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 S1PR5Q9H228 398 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 PTPRHQ9HD43 1115 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 MRPL17Q9NRX2 175 aaKnown RBP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 LARSQ9P2J5 1176 aaKnown RBP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 FBXO2Q9UK22 296 aaPredicted RBP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 DENND4AQ7Z401 1863 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 SFI1A8K8P3 1242 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 PI4K2BG5E9Z4 385 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 H0YCG3 227 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 SLC16A4O15374 487 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 THP07101 528 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 SCP2P22307 547 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 PROZP22891 400 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 GRM5P41594 1212 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 GLUD2P49448 558 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 SMTNP53814 917 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 ZNF445P59923 1031 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 RAD51AP2Q09MP3 1159 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 NAB2Q15742 525 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 FOXD4L6Q3SYB3 417 aaPredicted RBP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 ZNF568Q3ZCX4 644 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 ARSHQ5FYA8 562 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 L1TD1Q5T7N2 865 aaKnown RBP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 FAM173BQ6P4H8 233 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 FOXD4L3Q6VB84 417 aaPredicted RBP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 GPBP1Q86WP2 473 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 RASSF8Q8NHQ8 419 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 SLC22A17Q8WUG5 538 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 LARP4BQ92615 738 aaKnown RBP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 RAD54LQ92698 747 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 SYAP1Q96A49 352 aaPredicted RBP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 REEP2Q9BRK0 252 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 TARS2Q9BW92 718 aaKnown RBP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 EMILIN2Q9BXX0 1053 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 ADAM28Q9UKQ2 775 aa14.47□□□□□ -0.09
ERCC3-209ENST00000494464 SRPRBQ9Y5M8 271 aaKnown RBP14.47□□□□□ -0.09
ERCC3-209ENST00000494464 PLXNA3P51805 1871 aa14.46□□□□□ -0.09
ERCC3-209ENST00000494464 PDCD11Q14690 1871 aaKnown RBP14.46□□□□□ -0.09
ERCC3-209ENST00000494464 CITO14578 2027 aa14.46□□□□□ -0.09
ERCC3-209ENST00000494464 TRIP11Q15643 1979 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 F8W810 466 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 ABLIM1O14639 778 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 CNPP09543 421 aaKnown RBP14.46□□□□□ -0.1
ERCC3-209ENST00000494464 MAPTP10636 758 aaKnown RBP14.46□□□□□ -0.1
ERCC3-209ENST00000494464 MCF2P10911 925 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 ZNF131P52739 623 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 NCKAP1LP55160 1127 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 DSG1Q02413 1049 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 ITIH3Q06033 890 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 STRN3Q13033 797 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 HSP90AA2PQ14568 343 aaPredicted RBP14.46□□□□□ -0.1
ERCC3-209ENST00000494464 CBX2Q14781 532 aaPredicted RBP14.46□□□□□ -0.1
ERCC3-209ENST00000494464 CAVIN1Q6NZI2 390 aaKnown RBP14.46□□□□□ -0.1
ERCC3-209ENST00000494464 FUT10Q6P4F1 479 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 MPZL3Q6UWV2 235 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms