RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 C7orf31Q8N865 590 aa2.98□□□□□ -1.93
PTPN12-212ENST00000494248 KIAA1958Q8N8K9 716 aa2.98□□□□□ -1.93
PTPN12-212ENST00000494248 PPP1R10Q96QC0 940 aaKnown RBP2.98□□□□□ -1.93
PTPN12-212ENST00000494248 SPON1Q9HCB6 807 aa2.98□□□□□ -1.93
PTPN12-212ENST00000494248 CABP5Q9NP86 173 aa2.98□□□□□ -1.93
PTPN12-212ENST00000494248 INTS7Q9NVH2 962 aaKnown RBP2.98□□□□□ -1.93
PTPN12-212ENST00000494248 RNF181Q9P0P0 153 aa2.98□□□□□ -1.93
PTPN12-212ENST00000494248 USP36Q9P275 1121 aaKnown RBP2.98□□□□□ -1.93
PTPN12-212ENST00000494248 TNPO3Q9Y5L0 923 aaKnown RBP2.98□□□□□ -1.93
PTPN12-212ENST00000494248 CACNA1IQ9P0X4 2223 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 H7C1D1 291 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 M0R2C6 588 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 SEC24DO94855 1032 aaPredicted RBP2.97□□□□□ -1.93
PTPN12-212ENST00000494248 PRPF6O94906 941 aaKnown RBP2.97□□□□□ -1.93
PTPN12-212ENST00000494248 APOL3O95236 402 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 BMP15O95972 392 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 CFIP05156 583 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 HLA-DOAP06340 250 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 SPATA31D3P0C874 917 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 PTX3P26022 381 aaPredicted RBP2.97□□□□□ -1.93
PTPN12-212ENST00000494248 FLT3P36888 993 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 IRX6P78412 446 aaPredicted RBP2.97□□□□□ -1.93
PTPN12-212ENST00000494248 KLF9Q13886 244 aaPredicted RBP2.97□□□□□ -1.93
PTPN12-212ENST00000494248 RASA3Q14644 834 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 DDB1Q16531 1140 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 SRSF7Q16629 238 aaKnown RBP eCLIP2.97□□□□□ -1.93
PTPN12-212ENST00000494248 HSP90AB4PQ58FF6 505 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 GORABQ5T7V8 394 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 CREB3L3Q68CJ9 461 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 SPATA31D4Q6ZUB0 917 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 UBE2R2Q712K3 238 aaPredicted RBP2.97□□□□□ -1.93
PTPN12-212ENST00000494248 ZSWIM2Q8NEG5 633 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 OR10H5Q8NGA6 315 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 NOL10Q9BSC4 688 aaKnown RBP2.97□□□□□ -1.93
PTPN12-212ENST00000494248 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.97□□□□□ -1.93
PTPN12-212ENST00000494248 SAMD15Q9P1V8 674 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 USP15Q9Y4E8 981 aaPredicted RBP2.97□□□□□ -1.93
PTPN12-212ENST00000494248 FPGT-TNNI3KV9GXZ4 949 aa2.97□□□□□ -1.93
PTPN12-212ENST00000494248 NOTCH2Q04721 2471 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 PTPDC1A2A3K4 754 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 PRR5-ARHGAP8B1AHC4 643 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 HMGB1P1B2RPK0 211 aaPredicted RBP2.96□□□□□ -1.94
PTPN12-212ENST00000494248 B5MCH6 92 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 PRR23D1E9PI22 279 aaPredicted RBP2.96□□□□□ -1.94
PTPN12-212ENST00000494248 TPD52L2O43399 206 aaKnown RBP2.96□□□□□ -1.94
PTPN12-212ENST00000494248 CDKL5O76039 1030 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 LY86O95711 162 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 PRR23D2P0DMB1 279 aaPredicted RBP2.96□□□□□ -1.94
PTPN12-212ENST00000494248 MGAT1P26572 445 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 CD69Q07108 199 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 EIF2B5Q13144 721 aaKnown RBP2.96□□□□□ -1.94
PTPN12-212ENST00000494248 SOGA3Q5TF21 947 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 CCDC181Q5TID7 509 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 GIMAP6Q6P9H5 292 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 UNQ6494/PRO21346Q6UXR6 183 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 TAS1R1Q7RTX1 841 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 TECPR1Q7Z6L1 1165 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 NOP9Q86U38 636 aaKnown RBP2.96□□□□□ -1.94
PTPN12-212ENST00000494248 FUBP1Q96AE4 644 aaKnown RBP2.96□□□□□ -1.94
PTPN12-212ENST00000494248 DNAJC7Q99615 494 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 MYL10Q9BUA6 226 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 TANGO6Q9C0B7 1094 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 NCOA5Q9HCD5 579 aaKnown RBP2.96□□□□□ -1.94
PTPN12-212ENST00000494248 METTL14Q9HCE5 456 aaKnown RBP2.96□□□□□ -1.94
PTPN12-212ENST00000494248 SLC17A6Q9P2U8 582 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 PCDHB6Q9Y5E3 794 aa2.96□□□□□ -1.94
PTPN12-212ENST00000494248 ZNF804BA4D1E1 1349 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 FOSP01100 380 aaPredicted RBP2.95□□□□□ -1.94
PTPN12-212ENST00000494248 RBP3P10745 1247 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 PTMSP20962 102 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 XPAP23025 273 aaPredicted RBP2.95□□□□□ -1.94
PTPN12-212ENST00000494248 PTGER1P34995 402 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 GTF2F1P35269 517 aaKnown RBP eCLIP2.95□□□□□ -1.94
PTPN12-212ENST00000494248 IGFALSP35858 605 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 DUSP2Q05923 314 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 SERINC3Q13530 473 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 EZH2Q15910 746 aaKnown RBP2.95□□□□□ -1.94
PTPN12-212ENST00000494248 ETFDHQ16134 617 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 NAALADL2Q58DX5 795 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 CCDC178Q5BJE1 867 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 MTX3Q5HYI7 312 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 B3GNTL1Q67FW5 361 aaPredicted RBP2.95□□□□□ -1.94
PTPN12-212ENST00000494248 ZNF626Q68DY1 528 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 DLK2Q6UY11 383 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 ZZZ3Q8IYH5 903 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 MSL3Q8N5Y2 521 aaKnown RBP2.95□□□□□ -1.94
PTPN12-212ENST00000494248 CDYL2Q8N8U2 506 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 RNF169Q8NCN4 708 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 DEPDC7Q96QD5 511 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 ELF4Q99607 663 aaPredicted RBP2.95□□□□□ -1.94
PTPN12-212ENST00000494248 FDXACB1Q9BRP7 624 aaPredicted RBP2.95□□□□□ -1.94
PTPN12-212ENST00000494248 POFUT1Q9H488 388 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 IFT57Q9NWB7 429 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 MAGEC2Q9UBF1 373 aaPredicted RBP2.95□□□□□ -1.94
PTPN12-212ENST00000494248 B4GALT6Q9UBX8 382 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 SPO11Q9Y5K1 396 aa2.95□□□□□ -1.94
PTPN12-212ENST00000494248 ZNF521Q96K83 1311 aa2.94□□□□□ -1.94
PTPN12-212ENST00000494248 A0A1W2PR48 441 aa2.94□□□□□ -1.94
PTPN12-212ENST00000494248 OPA1O60313 960 aa2.94□□□□□ -1.94
PTPN12-212ENST00000494248 RAB11FIP3O75154 756 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms