RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 OGFRQ9NZT2 677 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 ARHGAP28Q9P2N2 729 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 COL4A2P08572 1712 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 ATP8B3O60423 1300 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 MPIG6BO95866 241 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 GABREP78334 506 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 RBL2Q08999 1139 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 ACAP1Q15027 740 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 FIGNQ5HY92 759 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 EGFLAMQ63HQ2 1017 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 CYB5RLQ6IPT4 315 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 TCTN3Q6NUS6 607 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 CEP85Q6P2H3 762 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 TRIM65Q6PJ69 517 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 Q6ZUG5 572 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 LARP4Q71RC2 724 aaKnown RBP eCLIP3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 APTXQ7Z2E3 356 aaKnown RBP3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 RALYLQ86SE5 291 aaKnown RBP3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 JAZF1Q86VZ6 243 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 CLUHP3Q96NS8 147 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 SCAND2PQ9GZW5 306 aaPredicted RBP3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 LSG1Q9H089 658 aaKnown RBP3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 SIRPGQ9P1W8 387 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 SFMBT1Q9UHJ3 866 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 RAB21Q9UL25 225 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 ATP23Q9Y6H3 246 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 SPAG9O60271 1321 aaKnown RBP3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 BPTFQ12830 3046 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 SSC5DA1L4H1 1573 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 FYB1O15117 783 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 C4BPAP04003 597 aaKnown RBP3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 AOAHP28039 575 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 HNRNPMP52272 730 aaKnown RBP eCLIP3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 GPR19Q15760 415 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 NBPF6Q5VWK0 638 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 KLHL36Q8N4N3 616 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 IGSF22Q8N9C0 903 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 DNERQ8NFT8 737 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 SH3RF3Q8TEJ3 882 aaPredicted RBP3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 ZNF669Q96BR6 464 aaPredicted RBP3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 NBPF4Q96M43 638 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 PCDH18Q9HCL0 1135 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 TRIM39Q9HCM9 518 aa3.01□□□□□ -1.93
CDC42EP3-205ENST00000494083 CCDC189A1A4V9 331 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 MATN2O00339 956 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 RAB11FIP3O75154 756 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 KCNA6P17658 529 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 PBX1P40424 430 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 STAT5BP51692 787 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 KCNQ1P51787 676 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 PPP2CBP62714 309 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 PPP2CAP67775 309 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 IGFL4Q6B9Z1 124 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 ARHGEF18Q6ZSZ5 1173 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3□□□□□ -1.93
CDC42EP3-205ENST00000494083 TCP11L2Q8N4U5 519 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 TMEM57Q8N5G2 664 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 GOLGA6L2Q8N9W4 650 aaPredicted RBP3□□□□□ -1.93
CDC42EP3-205ENST00000494083 ZNF830Q96NB3 372 aaPredicted RBP3□□□□□ -1.93
CDC42EP3-205ENST00000494083 MAGEL2Q9UJ55 1249 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 PHIPQ8WWQ0 1821 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 ANK1P16157 1881 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 TCRBV16S1A1N1A0A5B0 115 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 PATE3B3GLJ2 98 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 APAF1O14727 1248 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 PPP1R12AO14974 1030 aaPredicted RBP3□□□□□ -1.93
CDC42EP3-205ENST00000494083 HSP90AA1P07900 732 aaKnown RBP3□□□□□ -1.93
CDC42EP3-205ENST00000494083 ENO2P09104 434 aaPredicted RBP3□□□□□ -1.93
CDC42EP3-205ENST00000494083 PTGS1P23219 599 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 AARSP49588 968 aaKnown RBP eCLIP3□□□□□ -1.93
CDC42EP3-205ENST00000494083 SQSTM1Q13501 440 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 BECN1Q14457 450 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 R3HDM1Q15032 1099 aaKnown RBP3□□□□□ -1.93
CDC42EP3-205ENST00000494083 SPDYAQ5MJ70 313 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 RPAINQ86UA6 219 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 Q8N1X5 172 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 C1orf131Q8NDD1 294 aaKnown RBP3□□□□□ -1.93
CDC42EP3-205ENST00000494083 SPATA20Q8TB22 786 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 ASB15Q8WXK1 588 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 ERCC4Q92889 916 aaPredicted RBP3□□□□□ -1.93
CDC42EP3-205ENST00000494083 MKL1Q969V6 931 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 NCOA5Q9HCD5 579 aaKnown RBP3□□□□□ -1.93
CDC42EP3-205ENST00000494083 INCENPQ9NQS7 918 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 PATJQ8NI35 1801 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 WDR90Q96KV7 1748 aa3□□□□□ -1.93
CDC42EP3-205ENST00000494083 NPEPPSL1A6NEC2 478 aa2.99□□□□□ -1.93
CDC42EP3-205ENST00000494083 KRT37O76014 449 aa2.99□□□□□ -1.93
CDC42EP3-205ENST00000494083 EPHB4P54760 987 aa2.99□□□□□ -1.93
CDC42EP3-205ENST00000494083 CATSPEREQ5SY80 951 aa2.99□□□□□ -1.93
CDC42EP3-205ENST00000494083 CIR1Q86X95 450 aaPredicted RBP2.99□□□□□ -1.93
CDC42EP3-205ENST00000494083 DHX40Q8IX18 779 aaKnown RBP2.99□□□□□ -1.93
CDC42EP3-205ENST00000494083 LMF1Q96S06 567 aa2.99□□□□□ -1.93
CDC42EP3-205ENST00000494083 GPR20Q99678 358 aa2.99□□□□□ -1.93
CDC42EP3-205ENST00000494083 RWDD1Q9H446 243 aaPredicted RBP2.99□□□□□ -1.93
CDC42EP3-205ENST00000494083 PLEKHD1A6NEE1 506 aa2.99□□□□□ -1.93
CDC42EP3-205ENST00000494083 SRRM3A6NNA2 597 aaPredicted RBP2.99□□□□□ -1.93
CDC42EP3-205ENST00000494083 PRPF6O94906 941 aaKnown RBP2.99□□□□□ -1.93
CDC42EP3-205ENST00000494083 CD83Q01151 205 aa2.99□□□□□ -1.93
CDC42EP3-205ENST00000494083 TMEM132BQ14DG7 1078 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms