RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ATP8B4Q8TF62 1192 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 PPP2R3CQ969Q6 453 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 CCDC34Q96HJ3 373 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 INSM2Q96T92 566 aaPredicted RBP13.45□□□□□ -0.26
UPF3A-210ENST00000493727 PLIN2Q99541 437 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 LXNQ9BS40 222 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 POLR3CQ9BUI4 534 aaPredicted RBP13.45□□□□□ -0.26
UPF3A-210ENST00000493727 NT5C3AQ9H0P0 336 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 AGO3Q9H9G7 860 aaKnown RBP13.45□□□□□ -0.26
UPF3A-210ENST00000493727 TUFT1Q9NNX1 390 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 ZNF302Q9NR11 478 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 HPSEQ9Y251 543 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 DKC1O60832 514 aaKnown RBP eCLIP13.44□□□□□ -0.26
UPF3A-210ENST00000493727 MED24O75448 989 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 P4HBP07237 508 aaKnown RBP13.44□□□□□ -0.26
UPF3A-210ENST00000493727 PLCG1P19174 1290 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 KLRC1P26715 233 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 RPA1P27694 616 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.262e-6■■■■□ 26
UPF3A-210ENST00000493727 CTTNQ14247 550 aaKnown RBP13.44□□□□□ -0.26
UPF3A-210ENST00000493727 CLUL1Q15846 466 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 TPH2Q8IWU9 490 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 IQUBQ8NA54 791 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 CNNM3Q8NE01 707 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 GPT2Q8TD30 523 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 TRAPPC12Q8WVT3 735 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 P2RX5Q93086 422 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 CCDC43Q96MW1 224 aaKnown RBP13.44□□□□□ -0.26
UPF3A-210ENST00000493727 POP1Q99575 1024 aaKnown RBP13.44□□□□□ -0.26
UPF3A-210ENST00000493727 MMTAG2Q9BU76 263 aaKnown RBP13.44□□□□□ -0.26
UPF3A-210ENST00000493727 DDX19AQ9NUU7 478 aaKnown RBP13.44□□□□□ -0.26
UPF3A-210ENST00000493727 DACT1Q9NYF0 836 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 RGL1Q9NZL6 768 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 GABBR1Q9UBS5 961 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 LRFN2Q9ULH4 789 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 PADI3Q9ULW8 664 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 KIAA1024Q9UPX6 916 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 MAFBQ9Y5Q3 323 aaPredicted RBP13.44□□□□□ -0.26
UPF3A-210ENST00000493727 FNDC1Q4ZHG4 1894 aaPredicted RBP13.44□□□□□ -0.26
UPF3A-210ENST00000493727 PLXNA4Q9HCM2 1894 aa13.44□□□□□ -0.26
UPF3A-210ENST00000493727 FAM237AA0A1B0GTK4 181 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 A0A1W2PRU2 124 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 LINC01565O15544 149 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 ZNF202O95125 648 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 CTSOP43234 321 aaPredicted RBP13.43□□□□□ -0.26
UPF3A-210ENST00000493727 QARSP47897 775 aaKnown RBP13.43□□□□□ -0.26
UPF3A-210ENST00000493727 PSMC5P62195 406 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 TMEM119Q4V9L6 283 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 SWSAP1Q6NVH7 229 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 CATSPER3Q86XQ3 398 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 CCDC60Q8IWA6 550 aaPredicted RBP13.43□□□□□ -0.26
UPF3A-210ENST00000493727 CKAP2LQ8IYA6 745 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 PRSS33Q8NF86 280 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 LINC01599Q8WXQ3 324 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 SYAP1Q96A49 352 aaPredicted RBP13.43□□□□□ -0.26
UPF3A-210ENST00000493727 MSLNLQ96KJ4 702 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 MFSD14AQ96MC6 490 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 ZSWIM4Q9H7M6 989 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 C1orf112Q9NSG2 853 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 USP25Q9UHP3 1055 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 PCDHGA11Q9Y5H2 935 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 VPS13AQ96RL7 3174 aa13.43□□□□□ -0.26
UPF3A-210ENST00000493727 SPTBN4Q9H254 2564 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 A0A087X0B3 334 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 GPR182O15218 404 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 RPS6KA5O75582 802 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 SLITRK3O94933 977 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 EYA4O95677 639 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 SSBP05455 408 aaKnown RBP eCLIP13.42□□□□□ -0.26
UPF3A-210ENST00000493727 MUTP22033 750 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 TMEM62Q0P6H9 643 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 NFX1Q12986 1120 aaKnown RBP13.42□□□□□ -0.26
UPF3A-210ENST00000493727 KLHL40Q2TBA0 621 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 HYIQ5T013 277 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 BMP8AQ7Z5Y6 402 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 RTN4RL1Q86UN2 441 aaPredicted RBP13.42□□□□□ -0.26
UPF3A-210ENST00000493727 FMR1NBQ8N0W7 255 aaPredicted RBP13.42□□□□□ -0.26
UPF3A-210ENST00000493727 ZBTB10Q96DT7 871 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 FAM167AQ96KS9 214 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 PNMA5Q96PV4 448 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 HSD17B14Q9BPX1 270 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 MAGEF1Q9HAY2 307 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 STK17AQ9UEE5 414 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 SERTAD1Q9UHV2 236 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 CD207Q9UJ71 328 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 HOOK1Q9UJC3 728 aaKnown RBP13.42□□□□□ -0.26
UPF3A-210ENST00000493727 DNM3Q9UQ16 869 aa13.42□□□□□ -0.26
UPF3A-210ENST00000493727 RIF1Q5UIP0 2472 aaKnown RBP13.42□□□□□ -0.26
UPF3A-210ENST00000493727 PTPRZ1P23471 2315 aaPredicted RBP13.42□□□□□ -0.26
UPF3A-210ENST00000493727 TTLL8A6PVC2 850 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 MAGEB2O15479 319 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 SPATA31C1P0DKV0 1188 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 SARSP49591 514 aaKnown RBP13.41□□□□□ -0.26
UPF3A-210ENST00000493727 ADAM15Q13444 863 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 SNW1Q13573 536 aaKnown RBP13.41□□□□□ -0.26
UPF3A-210ENST00000493727 DHX8Q14562 1220 aaKnown RBP13.41□□□□□ -0.26
UPF3A-210ENST00000493727 ECM1Q16610 540 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 UGCGQ16739 394 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 LONRF3Q496Y0 759 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 CAVIN1Q6NZI2 390 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms