RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 TRIM6Q9C030 488 aaPredicted RBP15.22■□□□□ 0.03
SAMM50-204ENST00000493161 PARP2Q9UGN5 583 aa15.22■□□□□ 0.03
SAMM50-204ENST00000493161 MED19A0JLT2 244 aaPredicted RBP15.21■□□□□ 0.03
SAMM50-204ENST00000493161 TTLL13PA6NNM8 815 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 WNT7AO00755 349 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 ADAM12O43184 909 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 TADA2AO75478 443 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 CTDNEP1O95476 244 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 FSHRP23945 695 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 POU5F1BQ06416 359 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 NCBP1Q09161 790 aaKnown RBP15.21■□□□□ 0.03
SAMM50-204ENST00000493161 NR5A1Q13285 461 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 TFDP1Q14186 410 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 PCBP1Q15365 356 aaKnown RBP eCLIP15.21■□□□□ 0.03
SAMM50-204ENST00000493161 SLC27A1Q6PCB7 646 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 CPLX2Q6PUV4 134 aaKnown RBP15.21■□□□□ 0.03
SAMM50-204ENST00000493161 C1orf210Q8IVY1 113 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 MAML2Q8IZL2 1156 aaPredicted RBP15.21■□□□□ 0.03
SAMM50-204ENST00000493161 CLSTN3Q9BQT9 956 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 GPRC5CQ9NQ84 441 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 SLC2A4RGQ9NR83 387 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.21■□□□□ 0.03
SAMM50-204ENST00000493161 PDRG1Q9NUG6 133 aa15.21■□□□□ 0.03
SAMM50-204ENST00000493161 DOCK6Q96HP0 2047 aa15.21■□□□□ 0.02
SAMM50-204ENST00000493161 EP300Q09472 2414 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-204ENST00000493161 A0A1B0GUA9 196 aa15.2■□□□□ 0.02
SAMM50-204ENST00000493161 CASTOR2A6NHX0 329 aa15.2■□□□□ 0.02
SAMM50-204ENST00000493161 C1RP00736 705 aa15.2■□□□□ 0.02
SAMM50-204ENST00000493161 IGFBP6P24592 240 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-204ENST00000493161 GRIK3Q13003 919 aa15.2■□□□□ 0.02
SAMM50-204ENST00000493161 HSP90AA2PQ14568 343 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-204ENST00000493161 MAEAQ7L5Y9 396 aa15.2■□□□□ 0.02
SAMM50-204ENST00000493161 PJA1Q8NG27 643 aa15.2■□□□□ 0.02
SAMM50-204ENST00000493161 PIGOQ8TEQ8 1089 aa15.2■□□□□ 0.02
SAMM50-204ENST00000493161 TNFRSF25Q93038 417 aa15.2■□□□□ 0.02
SAMM50-204ENST00000493161 POLR3FQ9H1D9 316 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-204ENST00000493161 SEMA4AQ9H3S1 761 aa15.2■□□□□ 0.02
SAMM50-204ENST00000493161 FBXW11Q9UKB1 542 aa15.2■□□□□ 0.02
SAMM50-204ENST00000493161 USP20Q9Y2K6 914 aa15.2■□□□□ 0.02
SAMM50-204ENST00000493161 MTF2Q9Y483 593 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-204ENST00000493161 PTGESO14684 152 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 CCL16O15467 120 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 DGAT1O75907 488 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 KIF4AO95239 1232 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 LYPLA2O95372 231 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 BAG4O95429 457 aaKnown RBP15.19■□□□□ 0.02
SAMM50-204ENST00000493161 RARRES1P49788 294 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 STARD6P59095 220 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 SNW1Q13573 536 aaKnown RBP15.19■□□□□ 0.02
SAMM50-204ENST00000493161 CEP57Q86XR8 500 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 GPR65Q8IYL9 337 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 SLFN12Q8IYM2 578 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 HACE1Q8IYU2 909 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 ITFG1Q8TB96 612 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 LNX1Q8TBB1 728 aaPredicted RBP15.19■□□□□ 0.02
SAMM50-204ENST00000493161 NFKBIZQ9BYH8 718 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 TM6SF1Q9BZW5 370 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 ANKEF1Q9NU02 776 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 CDH7Q9ULB5 785 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 TPCN1Q9ULQ1 816 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 CACNA1AO00555 2505 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 DNAH14Q0VDD8 3507 aa15.19■□□□□ 0.02
SAMM50-204ENST00000493161 STK36Q9NRP7 1315 aa15.18■□□□□ 0.02
SAMM50-204ENST00000493161 USO1O60763 962 aaKnown RBP15.18■□□□□ 0.02
SAMM50-204ENST00000493161 TUSC3Q13454 348 aa15.18■□□□□ 0.02
SAMM50-204ENST00000493161 NAB2Q15742 525 aa15.18■□□□□ 0.02
SAMM50-204ENST00000493161 FAM171A1Q5VUB5 890 aa15.18■□□□□ 0.02
SAMM50-204ENST00000493161 FGF13Q92913 245 aa15.18■□□□□ 0.02
SAMM50-204ENST00000493161 NAP1L4Q99733 375 aaKnown RBP15.18■□□□□ 0.02
SAMM50-204ENST00000493161 TTPALQ9BTX7 342 aa15.18■□□□□ 0.02
SAMM50-204ENST00000493161 HCFC1R1Q9NWW0 138 aa15.18■□□□□ 0.02
SAMM50-204ENST00000493161 PCDHA12Q9UN75 941 aa15.18■□□□□ 0.02
SAMM50-204ENST00000493161 SF3B1O75533 1304 aaKnown RBP eCLIP15.17■□□□□ 0.02
SAMM50-204ENST00000493161 MYH15Q9Y2K3 1946 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 LRRIQ4A6NIV6 560 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 PFKFB2O60825 505 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 CDKL5O76039 1030 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 EDN1P05305 212 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 C8AP07357 584 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 FDPSP14324 419 aaKnown RBP15.17■□□□□ 0.02
SAMM50-204ENST00000493161 CD72P21854 359 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 TXKP42681 527 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 CREMQ03060 361 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 PSMD5Q16401 504 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 CALCRLQ16602 461 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 DGLUCYQ7Z3D6 616 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 SUMF1Q8NBK3 374 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 PIK3R5Q8WYR1 880 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 HINFPQ9BQA5 517 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 KXD1Q9BQD3 176 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 DDX23Q9BUQ8 820 aaKnown RBP15.17■□□□□ 0.02
SAMM50-204ENST00000493161 PDZD7Q9H5P4 517 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 TTC12Q9H892 705 aaPredicted RBP15.17■□□□□ 0.02
SAMM50-204ENST00000493161 SNTG2Q9NY99 539 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 ORC3Q9UBD5 711 aaPredicted RBP15.17■□□□□ 0.02
SAMM50-204ENST00000493161 POLIQ9UNA4 740 aa15.17■□□□□ 0.02
SAMM50-204ENST00000493161 FANCMQ8IYD8 2048 aa15.16■□□□□ 0.02
SAMM50-204ENST00000493161 KANSL1LA0AUZ9 987 aa15.16■□□□□ 0.02
SAMM50-204ENST00000493161 HNRNPA1P09651 372 aaKnown RBP eCLIP15.16■□□□□ 0.02
SAMM50-204ENST00000493161 SPATA31C1P0DKV0 1188 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms