RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 AKAP5P24588 427 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 RPA1P27694 616 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 CCT6AP40227 531 aaKnown RBP12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 MTHFRP42898 656 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 OR1G1P47890 313 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 GIT2Q14161 759 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 TFDP1Q14186 410 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 MXD4Q14582 209 aaPredicted RBP12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 FOXD4L6Q3SYB3 417 aaPredicted RBP12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 NOTUMQ6P988 496 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 POTEGQ6S5H5 508 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 FOXD4L3Q6VB84 417 aaPredicted RBP12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 CATSPER3Q86XQ3 398 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 KRI1Q8N9T8 703 aaKnown RBP12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 LINC00301Q8NCQ3 95 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 RASSF8Q8NHQ8 419 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 RABGGTAQ92696 567 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 NECTIN4Q96NY8 510 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 USP28Q96RU2 1077 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 POLR3CQ9BUI4 534 aaPredicted RBP12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 NT5C3AQ9H0P0 336 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 CXCL16Q9H2A7 254 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 DNM3Q9UQ16 869 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 USP20Q9Y2K6 914 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 MORC2Q9Y6X9 1032 aaPredicted RBP12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 DCHS1Q96JQ0 3298 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 DMDP11532 3685 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 DOCK6Q96HP0 2047 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 GOLGA6L4A6NEF3 574 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 SOD2P04179 222 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 AXLP30530 894 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 DDIT3P35638 169 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 NASPP49321 788 aaPredicted RBP12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 DNM1Q05193 864 aaKnown RBP12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 PKP1Q13835 747 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 ZBTB33Q86T24 672 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 CABP7Q86V35 215 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 IGSF22Q8N9C0 903 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 CNNM3Q8NE01 707 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 CCDC51Q96ER9 411 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 SPATA32Q96LK8 384 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 RIPOR3Q96MK2 946 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 NFKBIZQ9BYH8 718 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 SFXN1Q9H9B4 322 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 FAM86C1Q9NVL1 165 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 KLK14Q9P0G3 267 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 DBR1Q9UK59 544 aaKnown RBP12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 RCOR1Q9UKL0 485 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 NR2E1Q9Y466 385 aa12.16□□□□□ -0.46
TMEM39A-211ENST00000491685 CACNA1AO00555 2505 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 LRRIQ4A6NIV6 560 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 PROB1E7EW31 1015 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 TEX28O15482 410 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 ALDH2P05091 517 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 URODP06132 367 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 KLRC2P26717 231 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 MARCKSP29966 332 aaPredicted RBP12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 ME1P48163 572 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 GLUD2P49448 558 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 POU5F1BQ06416 359 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 PTPAQ15257 358 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 ECM1Q16610 540 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 KIAA0319Q5VV43 1072 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 CDCA2Q69YH5 1023 aaPredicted RBP12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 GPR149Q86SP6 731 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 HACE1Q8IYU2 909 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 TDRD5Q8NAT2 981 aaKnown RBP12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 SNX29Q8TEQ0 813 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 RPS6KC1Q96S38 1066 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 PAAF1Q9BRP4 392 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 GPR62Q9BZJ7 368 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 TRIM6Q9C030 488 aaPredicted RBP12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 POLD4Q9HCU8 107 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 UBN1Q9NPG3 1134 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 MAN1C1Q9NR34 630 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 MRPL17Q9NRX2 175 aaKnown RBP12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 FAM13BQ9NYF5 915 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 KANSL3Q9P2N6 904 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 LIMD1Q9UGP4 676 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 SORCS3Q9UPU3 1222 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 ZDHHC9Q9Y397 364 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 VPS13AQ96RL7 3174 aa12.15□□□□□ -0.46
TMEM39A-211ENST00000491685 PDCD11Q14690 1871 aaKnown RBP12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 A0A1B0GUA9 196 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 CUTAO60888 179 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 N4BP1O75113 896 aaKnown RBP12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 NUBP1P53384 320 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 MTMR3Q13615 1198 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 ZRSR1Q15695 479 aaKnown RBP12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 ATAT1Q5SQI0 421 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 SLC27A1Q6PCB7 646 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 ELMSAN1Q6PJG2 1045 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 PPFIBP1Q86W92 1011 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 ZDHHC14Q8IZN3 488 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 ATOH1Q92858 354 aaPredicted RBP12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 PYM1Q9BRP8 204 aaKnown RBP12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 KIFC3Q9BVG8 833 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 EMILIN2Q9BXX0 1053 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 CCDC113Q9H0I3 377 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms