RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 MAPK7Q13164 816 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 PRPF4BQ13523 1007 aaKnown RBP9.84□□□□□ -0.83
HDAC3-211ENST00000491581 TMEM132AQ24JP5 1023 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 MCTP1Q6DN14 999 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 CD300LGQ6UXG3 332 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 RSPO2Q6UXX9 243 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-211ENST00000491581 GPR149Q86SP6 731 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 CEP57Q86XR8 500 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 FBXL6Q8N531 539 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 TMEM105Q8N8V8 129 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 ZNF707Q96C28 371 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-211ENST00000491581 ZBTB45Q96K62 511 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-211ENST00000491581 PNMA5Q96PV4 448 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 NACC1Q96RE7 527 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 MYADMQ96S97 322 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 LLPHQ9BRT6 129 aaKnown RBP9.84□□□□□ -0.83
HDAC3-211ENST00000491581 CHST7Q9NS84 486 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 PPME1Q9Y570 386 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 DOCK8Q8NF50 2099 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 CCDC169A6NNP5 214 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 H0Y858 1186 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 NRG2O14511 850 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-211ENST00000491581 TGM5O43548 720 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 HIP1RO75146 1068 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 HARSP12081 509 aaKnown RBP9.83□□□□□ -0.84
HDAC3-211ENST00000491581 U2AF2P26368 475 aaKnown RBP eCLIP9.83□□□□□ -0.84
HDAC3-211ENST00000491581 GJB2P29033 226 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 AXLP30530 894 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 BRCC3P46736 316 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 RBM25P49756 843 aaKnown RBP9.83□□□□□ -0.84
HDAC3-211ENST00000491581 DSG1Q02413 1049 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 ITIH3Q06033 890 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 POU5F1BQ06416 359 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 SPAG1Q07617 926 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 ATAT1Q5SQI0 421 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 FAM171A1Q5VUB5 890 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 ERICH6BQ5W0A0 696 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 EXOC8Q8IYI6 725 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 IGSF22Q8N9C0 903 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 TDRD5Q8NAT2 981 aaKnown RBP9.83□□□□□ -0.84
HDAC3-211ENST00000491581 DEPTORQ8TB45 409 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 TMX3Q96JJ7 454 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 RIPOR3Q96MK2 946 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 ZMAT2Q96NC0 199 aaKnown RBP9.83□□□□□ -0.84
HDAC3-211ENST00000491581 RPP25Q9BUL9 199 aaKnown RBP9.83□□□□□ -0.84
HDAC3-211ENST00000491581 TARS2Q9BW92 718 aaKnown RBP9.83□□□□□ -0.84
HDAC3-211ENST00000491581 EMILIN2Q9BXX0 1053 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 NFKBIZQ9BYH8 718 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 HAPLN2Q9GZV7 340 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 IKZF4Q9H2S9 585 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 SFXN1Q9H9B4 322 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.83□□□□□ -0.84
HDAC3-211ENST00000491581 PRMT7Q9NVM4 692 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-211ENST00000491581 HCFC1R1Q9NWW0 138 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 KANSL3Q9P2N6 904 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 ADAM28Q9UKQ2 775 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 GIT1Q9Y2X7 761 aa9.83□□□□□ -0.84
HDAC3-211ENST00000491581 SLC16A4O15374 487 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 TADA2AO75478 443 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 CFHP08603 1231 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 XRCC6P12956 609 aaKnown RBP eCLIP9.82□□□□□ -0.84
HDAC3-211ENST00000491581 AVPR2P30518 371 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 MTHFRP42898 656 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 NAMPTP43490 491 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 NPTX2P47972 431 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 CLCN6P51797 869 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 CLCNKBP51801 687 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 GRIK3Q13003 919 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 HSP90AA2PQ14568 343 aaPredicted RBP9.82□□□□□ -0.84
HDAC3-211ENST00000491581 CWF19L1Q69YN2 538 aaKnown RBP9.82□□□□□ -0.84
HDAC3-211ENST00000491581 FAM43BQ6ZT52 329 aaPredicted RBP9.82□□□□□ -0.84
HDAC3-211ENST00000491581 GET4Q7L5D6 327 aaPredicted RBP9.82□□□□□ -0.84
HDAC3-211ENST00000491581 BMP8AQ7Z5Y6 402 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 ZBTB8OSQ8IWT0 167 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 CNNM3Q8NE01 707 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 MCPH1Q8NEM0 835 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 C18orf25Q96B23 403 aaPredicted RBP9.82□□□□□ -0.84
HDAC3-211ENST00000491581 ZSCAN31Q96LW9 406 aaPredicted RBP9.82□□□□□ -0.84
HDAC3-211ENST00000491581 MFSD14AQ96MC6 490 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 CLSTN3Q9BQT9 956 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 COLEC11Q9BWP8 271 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 CDT1Q9H211 546 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 RXFP1Q9HBX9 757 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 DZANK1Q9NVP4 752 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 SORCS3Q9UPU3 1222 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 NR2E1Q9Y466 385 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 CITO14578 2027 aa9.82□□□□□ -0.84
HDAC3-211ENST00000491581 VWA3AA6NCI4 1184 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 ACKR2O00590 384 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 ABLIM1O14639 778 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 N4BP3O15049 544 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 CCL16O15467 120 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 GLUD1P00367 558 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 NPR3P17342 541 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 TKTP29401 623 aaKnown RBP9.81□□□□□ -0.84
HDAC3-211ENST00000491581 GBP2P32456 591 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-211ENST00000491581 HMGN5P82970 282 aaKnown RBP9.81□□□□□ -0.84
HDAC3-211ENST00000491581 TUSC3Q13454 348 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 DHX8Q14562 1220 aaKnown RBP9.81□□□□□ -0.84
HDAC3-211ENST00000491581 MAPK6Q16659 721 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms