RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 DLK2Q6UY11 383 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 MOB2Q70IA6 237 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 FASTKD5Q7L8L6 764 aaKnown RBP5.49□□□□□ -1.53
CSTF1-205ENST00000490539 DPH6Q7L8W6 267 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 RASAL3Q86YV0 1011 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 MAPKAPK5Q8IW41 473 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 PPIL6Q8IXY8 311 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 KBTBD3Q8NAB2 608 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 OPTNQ96CV9 577 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 CHAMP1Q96JM3 812 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 LNPKQ9C0E8 428 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 AP5M1Q9H0R1 490 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 OSBPL5Q9H0X9 879 aaPredicted RBP5.49□□□□□ -1.53
CSTF1-205ENST00000490539 CABP5Q9NP86 173 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 ATP8A2Q9NTI2 1148 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 MCM9Q9NXL9 1143 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 SAGE1Q9NXZ1 904 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 SIRPGQ9P1W8 387 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 FAN1Q9Y2M0 1017 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 KCTD3Q9Y597 815 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 MUC6Q6W4X9 2439 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 COL2A1P02458 1487 aaPredicted RBP5.48□□□□□ -1.53
CSTF1-205ENST00000490539 ZC3H12DA2A288 527 aaKnown RBP5.48□□□□□ -1.53
CSTF1-205ENST00000490539 PDPK1O15530 556 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 MBD4O95243 580 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 GLI4P10075 376 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 XRCC6P12956 609 aaKnown RBP eCLIP5.48□□□□□ -1.53
CSTF1-205ENST00000490539 ADD2P35612 726 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 LTBRP36941 435 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 TDO2P48775 406 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 PDE1AP54750 535 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 GFRA1P56159 465 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 RHBDL3P58872 404 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 PRR5P85299 388 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 PPIL2Q13356 520 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 KIF22Q14807 665 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 SKOR2Q2VWA4 1001 aaPredicted RBP5.48□□□□□ -1.53
CSTF1-205ENST00000490539 BMP2KLQ5H9B9 411 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 CASC1Q6TDU7 716 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 DCP2Q8IU60 420 aaKnown RBP5.48□□□□□ -1.53
CSTF1-205ENST00000490539 SCYL3Q8IZE3 742 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.48□□□□□ -1.53
CSTF1-205ENST00000490539 NPLOC4Q8TAT6 608 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 FRS2Q8WU20 508 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 RUFY2Q8WXA3 655 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 APPBP2Q92624 585 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 ZKSCAN4Q969J2 545 aaPredicted RBP5.48□□□□□ -1.53
CSTF1-205ENST00000490539 RILPL2Q969X0 211 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 TRMT2BQ96GJ1 504 aaKnown RBP5.48□□□□□ -1.53
CSTF1-205ENST00000490539 WNK4Q96J92 1243 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 TEPSINQ96N21 525 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 AARSD1Q9BTE6 412 aaKnown RBP5.48□□□□□ -1.53
CSTF1-205ENST00000490539 LGR4Q9BXB1 951 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 CNTD2Q9H8S5 307 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 RRAGDQ9NQL2 400 aaPredicted RBP5.48□□□□□ -1.53
CSTF1-205ENST00000490539 DIAPH3Q9NSV4 1193 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 MARCH2Q9P0N8 246 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 STAP2Q9UGK3 403 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 SWAP70Q9UH65 585 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 SAP30BPQ9UHR5 308 aaKnown RBP5.48□□□□□ -1.53
CSTF1-205ENST00000490539 SERPINB13Q9UIV8 391 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 PALD1Q9ULE6 856 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 COA3Q9Y2R0 106 aaPredicted RBP5.48□□□□□ -1.53
CSTF1-205ENST00000490539 SLC4A4Q9Y6R1 1079 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 FLT1P17948 1338 aa5.48□□□□□ -1.53
CSTF1-205ENST00000490539 KIAA0100Q14667 2235 aaKnown RBP5.47□□□□□ -1.53
CSTF1-205ENST00000490539 HTTP42858 3142 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 ATRXP46100 2492 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 ATRNL1Q5VV63 1379 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 CCL15-CCL14A0A0B4J2E2 113 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 A0A1W2PQU0 124 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 DDTLA6NHG4 134 aaPredicted RBP5.47□□□□□ -1.53
CSTF1-205ENST00000490539 MPHOSPH10O00566 681 aaKnown RBP5.47□□□□□ -1.53
CSTF1-205ENST00000490539 CXCL11O14625 94 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 TBX1O43435 398 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 KRT1P04264 644 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 NCAM1P13591 858 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 TM4SF4P48230 202 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 DYNLL1P63167 89 aaKnown RBP5.47□□□□□ -1.53
CSTF1-205ENST00000490539 ZNF200P98182 395 aaPredicted RBP5.47□□□□□ -1.53
CSTF1-205ENST00000490539 MAP4K2Q12851 820 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 CCL15Q16663 113 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 MTERF2Q49AM1 385 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 CERKLQ49MI3 558 aaPredicted RBP5.47□□□□□ -1.53
CSTF1-205ENST00000490539 MROH9Q5TGP6 573 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 TCERG1LQ5VWI1 586 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 TSHZ3Q63HK5 1081 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 WWC2Q6AWC2 1192 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 GIMAP6Q6P9H5 292 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 CCAR1Q8IX12 1150 aaKnown RBP5.47□□□□□ -1.53
CSTF1-205ENST00000490539 ALG3Q92685 438 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 TMEM169Q96HH4 297 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 CLMNQ96JQ2 1002 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 GBP4Q96PP9 640 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 FEZ1Q99689 392 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 RNF38Q9H0F5 515 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 CCDC113Q9H0I3 377 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 NAPBQ9H115 298 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 SH2D4AQ9H788 454 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 ARMT1Q9H993 441 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms