RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 SEPT9Q9UHD8 586 aaPredicted RBP15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 ADAM28Q9UKQ2 775 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 KCNH3Q9ULD8 1083 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 MRPS23Q9Y3D9 190 aaKnown RBP15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 PIAS3Q9Y6X2 628 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 VWA8A3KMH1 1905 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 LOC400499M0QZD8 3231 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 SMCO2A6NFE2 343 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 ADAM12O43184 909 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 NR1I2O75469 434 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 EPN2O95208 641 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 CYP3A4P08684 503 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 FCARP24071 287 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 RBM25P49756 843 aaKnown RBP15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 PTH1RQ03431 593 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 SOWAHCQ53LP3 525 aaPredicted RBP15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 PLEKHM2Q8IWE5 1019 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 MINDY3Q9H8M7 445 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 UBN1Q9NPG3 1134 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 GDE1Q9NZC3 331 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 CACNG4Q9UBN1 327 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 HES2Q9Y543 173 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 IPPQ9Y573 584 aa15.35■□□□□ 0.05
EXOSC3-207ENST00000490516 CCDC69A6NI79 296 aa15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 CHMP2AO43633 222 aa15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 CEBPBP17676 345 aa15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 CCNE1P24864 410 aa15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 SETQ01105 290 aaPredicted RBP15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 PTGDRQ13258 359 aa15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 PRR16Q569H4 304 aa15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 PLA2G2CQ5R387 149 aa15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 AXDND1Q5T1B0 1012 aaPredicted RBP15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 TCEAL6Q6IPX3 200 aa15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 Q6ZS52 159 aa15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 TCEAL3Q969E4 200 aa15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 TRMT61BQ9BVS5 477 aaKnown RBP15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 EIF2AQ9BY44 585 aaKnown RBP15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 NIFKQ9BYG3 293 aaKnown RBP15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 ZNF334Q9HCZ1 680 aaPredicted RBP15.34■□□□□ 0.05
EXOSC3-207ENST00000490516 SMG1Q96Q15 3661 aaKnown RBP15.33■□□□□ 0.05
EXOSC3-207ENST00000490516 ADAMTS3O15072 1205 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 STBD1O95210 358 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 PAPSS2O95340 614 aaPredicted RBP15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 RHOP08100 348 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 CALM1P0DP23 149 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 CALM2P0DP24 149 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 CALM3P0DP25 149 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 RAP1GAPP47736 663 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 PSMD5Q16401 504 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 WDR44Q5JSH3 913 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 PPP1R18Q6NYC8 613 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 CASC1Q6TDU7 716 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 KBTBD6Q86V97 674 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 WDR5BQ86VZ2 330 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 CEP57Q86XR8 500 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 MAP4K3Q8IVH8 894 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 LNX1Q8TBB1 728 aaPredicted RBP15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 HASPINQ8TF76 798 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 LOXL4Q96JB6 756 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 APOL6Q9BWW8 343 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 CNTNAP5Q8WYK1 1306 aa15.33■□□□□ 0.04
EXOSC3-207ENST00000490516 IGSF10Q6WRI0 2623 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 SH2B2O14492 632 aaPredicted RBP15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 PRC1O43663 620 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 MAFO75444 373 aaPredicted RBP15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 TADA2AO75478 443 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 POU2F2P09086 479 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 GDI1P31150 447 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 FAM78AQ5JUQ0 283 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 SH3PXD2AQ5TCZ1 1133 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 TEX2Q8IWB9 1127 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 FANCBQ8NB91 859 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 CNNM3Q8NE01 707 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 IRF7Q92985 503 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 PAAF1Q9BRP4 392 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 TTPALQ9BTX7 342 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 OSBPL3Q9H4L5 887 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 ZFP14Q9HCL3 533 aa15.32■□□□□ 0.04
EXOSC3-207ENST00000490516 C4orf47A7E2U8 309 aa15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 SRGAP2CP0DJJ0 459 aa15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 MPLP40238 635 aa15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 XKR3Q5GH77 459 aa15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 CACNA2D4Q7Z3S7 1137 aa15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 GSTCDQ8NEC7 633 aa15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 PIK3R5Q8WYR1 880 aa15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 GJA10Q969M2 543 aa15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 LENG9Q96B70 501 aa15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 KIF12Q96FN5 646 aa15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 EDEM2Q9BV94 578 aa15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 UNC45AQ9H3U1 944 aa15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 COL4A3BPQ9Y5P4 624 aa15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 SF3B1O75533 1304 aaKnown RBP eCLIP15.31■□□□□ 0.04
EXOSC3-207ENST00000490516 RPP40O75818 363 aaKnown RBP15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 PXNP49023 591 aaPredicted RBP15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 UVSSAQ2YD98 709 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 FAM171A1Q5VUB5 890 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 B4GALNT3Q6L9W6 998 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 KIAA1211LQ6NV74 962 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 C19orf48Q6RUI8 117 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 VITQ6UXI7 678 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms