RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 KRT18P05783 430 aaKnown RBP19.16■□□□□ 0.66
SEC13-218ENST00000490283 ADH1AP07327 375 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 TXLNAP40222 546 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 MAPK7Q13164 816 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 HSP90AA2PQ14568 343 aaPredicted RBP19.16■□□□□ 0.66
SEC13-218ENST00000490283 TMEM31Q5JXX7 168 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 SYCE2Q6PIF2 218 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 GPBP1Q86WP2 473 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 GSTCDQ8NEC7 633 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 SUSD6Q92537 303 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 NECTIN4Q96NY8 510 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 KLHL5Q96PQ7 755 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 ACO2Q99798 780 aaKnown RBP19.16■□□□□ 0.66
SEC13-218ENST00000490283 S1PR5Q9H228 398 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 ZSCAN16Q9H4T2 348 aaPredicted RBP19.16■□□□□ 0.66
SEC13-218ENST00000490283 ADAM28Q9UKQ2 775 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 ODF2LQ9ULJ1 636 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 PLCG1P19174 1290 aa19.15■□□□□ 0.66
SEC13-218ENST00000490283 CREMQ03060 361 aa19.15■□□□□ 0.66
SEC13-218ENST00000490283 RESTQ13127 1097 aa19.15■□□□□ 0.66
SEC13-218ENST00000490283 DHX8Q14562 1220 aaKnown RBP19.15■□□□□ 0.66
SEC13-218ENST00000490283 USP41Q3LFD5 358 aa19.15■□□□□ 0.66
SEC13-218ENST00000490283 FUT10Q6P4F1 479 aa19.15■□□□□ 0.66
SEC13-218ENST00000490283 SNX21Q969T3 373 aa19.15■□□□□ 0.66
SEC13-218ENST00000490283 RPGRIP1Q96KN7 1286 aa19.15■□□□□ 0.66
SEC13-218ENST00000490283 RIPOR3Q96MK2 946 aa19.15■□□□□ 0.66
SEC13-218ENST00000490283 NTPCRQ9BSD7 190 aaKnown RBP19.15■□□□□ 0.66
SEC13-218ENST00000490283 TARS2Q9BW92 718 aaKnown RBP19.15■□□□□ 0.66
SEC13-218ENST00000490283 ADAM7Q9H2U9 754 aa19.15■□□□□ 0.66
SEC13-218ENST00000490283 CCDC39Q9UFE4 941 aa19.15■□□□□ 0.66
SEC13-218ENST00000490283 DPP7Q9UHL4 492 aa19.15■□□□□ 0.66
SEC13-218ENST00000490283 GTF3C3Q9Y5Q9 886 aa19.15■□□□□ 0.66
SEC13-218ENST00000490283 CLIC4Q9Y696 253 aa19.15■□□□□ 0.66
SEC13-218ENST00000490283 SF3B1O75533 1304 aaKnown RBP eCLIP19.15■□□□□ 0.664e-7■■■■■ 40.1
SEC13-218ENST00000490283 CASTOR2A6NHX0 329 aa19.14■□□□□ 0.65
SEC13-218ENST00000490283 STX6O43752 255 aa19.14■□□□□ 0.65
SEC13-218ENST00000490283 FAM13AO94988 1023 aa19.14■□□□□ 0.65
SEC13-218ENST00000490283 CNPP09543 421 aaKnown RBP19.14■□□□□ 0.65
SEC13-218ENST00000490283 MCF2P10911 925 aa19.14■□□□□ 0.65
SEC13-218ENST00000490283 EPCAMP16422 314 aa19.14■□□□□ 0.65
SEC13-218ENST00000490283 GRM5P41594 1212 aa19.14■□□□□ 0.65
SEC13-218ENST00000490283 MTHFRP42898 656 aa19.14■□□□□ 0.65
SEC13-218ENST00000490283 KARSQ15046 597 aaKnown RBP19.14■□□□□ 0.65
SEC13-218ENST00000490283 RARS2Q5T160 578 aaKnown RBP19.14■□□□□ 0.65
SEC13-218ENST00000490283 SLC22A17Q8WUG5 538 aa19.14■□□□□ 0.65
SEC13-218ENST00000490283 KHSRPQ92945 711 aaKnown RBP eCLIP19.14■□□□□ 0.65
SEC13-218ENST00000490283 FBXL18Q96ME1 805 aa19.14■□□□□ 0.65
SEC13-218ENST00000490283 CDT1Q9H211 546 aa19.14■□□□□ 0.65
SEC13-218ENST00000490283 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.14■□□□□ 0.65
SEC13-218ENST00000490283 PTGESO14684 152 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 TBCAO75347 108 aaKnown RBP19.13■□□□□ 0.65
SEC13-218ENST00000490283 SCP2P22307 547 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 MARCKSP29966 332 aaPredicted RBP19.13■□□□□ 0.65
SEC13-218ENST00000490283 MATR3P43243 847 aaKnown RBP eCLIP19.13■□□□□ 0.65
SEC13-218ENST00000490283 DSG1Q02413 1049 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 CACNB1Q02641 598 aaPredicted RBP19.13■□□□□ 0.65
SEC13-218ENST00000490283 CEBPZQ03701 1054 aaKnown RBP19.13■□□□□ 0.65
SEC13-218ENST00000490283 GRIN1Q05586 938 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 ELAVL2Q12926 359 aaKnown RBP19.13■□□□□ 0.65
SEC13-218ENST00000490283 MPZL3Q6UWV2 235 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 ZBTB33Q86T24 672 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 TMEM161BQ8NDZ6 487 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 LARP4BQ92615 738 aaKnown RBP19.13■□□□□ 0.65
SEC13-218ENST00000490283 RAD54LQ92698 747 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 BICD1Q96G01 975 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 CCSER1Q9C0I3 900 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 ZHX3Q9H4I2 956 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 SFXN1Q9H9B4 322 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 ANKFY1Q9P2R3 1169 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 MTMR6Q9Y217 621 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 NR2E1Q9Y466 385 aa19.13■□□□□ 0.65
SEC13-218ENST00000490283 NPHP3-ACAD11A0A0J9YXS1 232 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 LOC730098B7Z3J9 87 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 F8W810 466 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 LILRB3O75022 631 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 TOM1L1O75674 476 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 HARSP12081 509 aaKnown RBP19.12■□□□□ 0.65
SEC13-218ENST00000490283 PDIA4P13667 645 aaKnown RBP19.12■□□□□ 0.65
SEC13-218ENST00000490283 CLCN4P51793 760 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 OSTNP61366 133 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 MCM6Q14566 821 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 PTPAQ15257 358 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 ATAT1Q5SQI0 421 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 TAS1R3Q7RTX0 852 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 TAS1R1Q7RTX1 841 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 RNF135Q8IUD6 432 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 GPR65Q8IYL9 337 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 RNF168Q8IYW5 571 aaPredicted RBP19.12■□□□□ 0.65
SEC13-218ENST00000490283 MYCT1Q8N699 235 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 RABGGTAQ92696 567 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 UROC1Q96N76 676 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 ACAP3Q96P50 834 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 REEP2Q9BRK0 252 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 PARVGQ9HBI0 331 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 SLC38A7Q9NVC3 462 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 SRPRBQ9Y5M8 271 aaKnown RBP19.12■□□□□ 0.65
SEC13-218ENST00000490283 MUC3AQ02505 3323 aa19.12■□□□□ 0.65
SEC13-218ENST00000490283 GPR37L1O60883 481 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 GLUD1P00367 558 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 MAPTP10636 758 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms