RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 CEP104O60308 925 aa17.32■□□□□ 0.36
SNX5-214ENST00000490175 LGR5O75473 907 aa17.32■□□□□ 0.36
SNX5-214ENST00000490175 YBX3P16989 372 aaKnown RBP eCLIP17.32■□□□□ 0.368e-7■■■■□ 21.2
SNX5-214ENST00000490175 CHRNB2P17787 502 aa17.32■□□□□ 0.36
SNX5-214ENST00000490175 AARSP49588 968 aaKnown RBP eCLIP17.32■□□□□ 0.36
SNX5-214ENST00000490175 EPHB4P54760 987 aa17.32■□□□□ 0.36
SNX5-214ENST00000490175 GPC5P78333 572 aa17.32■□□□□ 0.36
SNX5-214ENST00000490175 EMBQ6PCB8 327 aa17.32■□□□□ 0.36
SNX5-214ENST00000490175 MOB2Q70IA6 237 aa17.32■□□□□ 0.36
SNX5-214ENST00000490175 MORC4Q8TE76 937 aa17.32■□□□□ 0.36
SNX5-214ENST00000490175 SCFD2Q8WU76 684 aa17.32■□□□□ 0.36
SNX5-214ENST00000490175 FGD4Q96M96 766 aa17.32■□□□□ 0.36
SNX5-214ENST00000490175 MMP19Q99542 508 aa17.32■□□□□ 0.36
SNX5-214ENST00000490175 TXNRD2Q9NNW7 524 aa17.32■□□□□ 0.36
SNX5-214ENST00000490175 H3BQF6 201 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 CCDC188H7C350 402 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 ADCY3O60266 1144 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 MTA2O94776 668 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 PDE6CP51160 858 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 EFNA5P52803 228 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 SLC7A5Q01650 507 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 CDR2Q01850 454 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 CLUL1Q15846 466 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 LY6KQ17RY6 165 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 HSP90B2PQ58FF3 399 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 CELF3Q5SZQ8 465 aaKnown RBP17.31■□□□□ 0.36
SNX5-214ENST00000490175 C11orf63Q6NUN7 778 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 PLPPR4Q7Z2D5 763 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 SHCBP1Q8NEM2 672 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 TCP11Q8WWU5 503 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 GDF3Q9NR23 364 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 C1orf112Q9NSG2 853 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 PSD3Q9NYI0 1048 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 HPCAL4Q9UM19 191 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 A0A0B4J269 797 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 CYP11B1P15538 503 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 ZACNQ401N2 412 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 IER5Q5VY09 327 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 GPAT2Q6NUI2 795 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 SLC47A2Q86VL8 602 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 GTF3C2Q8WUA4 911 aaPredicted RBP17.31■□□□□ 0.36
SNX5-214ENST00000490175 EXOC4Q96A65 974 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 KRT12Q99456 494 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 GPR20Q99678 358 aa17.31■□□□□ 0.36
SNX5-214ENST00000490175 ZCCHC17Q9NP64 241 aaKnown RBP17.31■□□□□ 0.36
SNX5-214ENST00000490175 PGK2P07205 417 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 HNRNPH2P55795 449 aaKnown RBP17.3■□□□□ 0.36
SNX5-214ENST00000490175 NLRP11P59045 1033 aaKnown RBP17.3■□□□□ 0.36
SNX5-214ENST00000490175 FMO1Q01740 532 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 NNTQ13423 1086 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 CAPSQ13938 189 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 Q3C1V9 767 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 WDR44Q5JSH3 913 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 ZPBP2Q6X784 338 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 EEPD1Q7L9B9 569 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 FAM71BQ8TC56 605 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 ZNF516Q92618 1163 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 PCDHB18PQ96TA0 734 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 MSTO1Q9BUK6 570 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 NOC2LQ9Y3T9 749 aaKnown RBP17.3■□□□□ 0.36
SNX5-214ENST00000490175 ADGRA2Q96PE1 1338 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 NOP56O00567 594 aaKnown RBP17.3■□□□□ 0.36
SNX5-214ENST00000490175 CLSTN1O94985 981 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 HEXIM1O94992 359 aaKnown RBP17.3■□□□□ 0.36
SNX5-214ENST00000490175 ARIH2O95376 493 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 C4BPAP04003 597 aaKnown RBP17.3■□□□□ 0.36
SNX5-214ENST00000490175 TNNI1P19237 187 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 SLC26A2P50443 739 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 SNAPC2Q13487 334 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 LDLRAD1Q5T700 205 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 CRELD2Q6UXH1 353 aaPredicted RBP17.3■□□□□ 0.36
SNX5-214ENST00000490175 EIF1ADQ8N9N8 165 aaKnown RBP17.3■□□□□ 0.36
SNX5-214ENST00000490175 ATP8B4Q8TF62 1192 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.3■□□□□ 0.362e-7■■■■■ 64.2
SNX5-214ENST00000490175 DHX38Q92620 1227 aaKnown RBP17.3■□□□□ 0.36
SNX5-214ENST00000490175 GLG1Q92896 1179 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 CAVIN3Q969G5 261 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 CARD9Q9H257 536 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 RBAKQ9NYW8 714 aaPredicted RBP17.3■□□□□ 0.36
SNX5-214ENST00000490175 CTTNBP2NLQ9P2B4 639 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 COG5Q9UP83 839 aa17.3■□□□□ 0.36
SNX5-214ENST00000490175 UNCXA6NJT0 531 aa17.29■□□□□ 0.36
SNX5-214ENST00000490175 MIF4GDA9UHW6 222 aaKnown RBP17.29■□□□□ 0.36
SNX5-214ENST00000490175 TULP1O00294 542 aaPredicted RBP17.29■□□□□ 0.36
SNX5-214ENST00000490175 DDX3YO15523 660 aaKnown RBP17.29■□□□□ 0.36
SNX5-214ENST00000490175 RNASE9P60153 205 aaKnown RBP17.29■□□□□ 0.36
SNX5-214ENST00000490175 MXD4Q14582 209 aaPredicted RBP17.29■□□□□ 0.36
SNX5-214ENST00000490175 GSPT2Q8IYD1 628 aaKnown RBP17.29■□□□□ 0.36
SNX5-214ENST00000490175 TATDN2Q93075 761 aa17.29■□□□□ 0.36
SNX5-214ENST00000490175 NAP1L3Q99457 506 aaPredicted RBP17.29■□□□□ 0.36
SNX5-214ENST00000490175 JPH2Q9BR39 696 aaPredicted RBP17.29■□□□□ 0.36
SNX5-214ENST00000490175 TARS2Q9BW92 718 aaKnown RBP17.29■□□□□ 0.36
SNX5-214ENST00000490175 HAPLN2Q9GZV7 340 aa17.29■□□□□ 0.36
SNX5-214ENST00000490175 R3HDMLQ9H3Y0 253 aa17.29■□□□□ 0.36
SNX5-214ENST00000490175 PNMA3Q9UL41 463 aa17.29■□□□□ 0.36
SNX5-214ENST00000490175 SCN4AP35499 1836 aa17.29■□□□□ 0.36
SNX5-214ENST00000490175 ZNFX1Q9P2E3 1918 aaKnown RBP17.29■□□□□ 0.36
SNX5-214ENST00000490175 ZC3H4Q9UPT8 1303 aaKnown RBP17.29■□□□□ 0.36
SNX5-214ENST00000490175 GLI1P08151 1106 aa17.28■□□□□ 0.36
SNX5-214ENST00000490175 MMEP08473 750 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms