RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 ORC3Q9UBD5 711 aaPredicted RBP11.87□□□□□ -0.51
UBP1-211ENST00000490112 FBXL21Q9UKT6 434 aa11.87□□□□□ -0.51
UBP1-211ENST00000490112 PRG3Q9Y2Y8 225 aaPredicted RBP11.87□□□□□ -0.51
UBP1-211ENST00000490112 TEX28O15482 410 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 EIF5BO60841 1220 aaKnown RBP11.86□□□□□ -0.51
UBP1-211ENST00000490112 PAPLNO95428 1278 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 EFEMP2O95967 443 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 AOC1P19801 751 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 ARL2P36404 184 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 MLH1P40692 756 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 CALCRLQ16602 461 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 USP41Q3LFD5 358 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 SLC27A1Q6PCB7 646 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 RNF168Q8IYW5 571 aaPredicted RBP11.86□□□□□ -0.51
UBP1-211ENST00000490112 FLCNQ8NFG4 579 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 EIF2AQ9BY44 585 aaKnown RBP11.86□□□□□ -0.51
UBP1-211ENST00000490112 CHST7Q9NS84 486 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 MARCH5Q9NX47 278 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 ZDHHC7Q9NXF8 308 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.86□□□□□ -0.51
UBP1-211ENST00000490112 FNIP2Q9P278 1114 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 WNT16Q9UBV4 365 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 ARID2Q68CP9 1835 aa11.86□□□□□ -0.51
UBP1-211ENST00000490112 NEMFO60524 1076 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 GBP2P32456 591 aaPredicted RBP11.85□□□□□ -0.51
UBP1-211ENST00000490112 SCNN1GP51170 649 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 FOXK2Q01167 660 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 MBTD1Q05BQ5 628 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 GRIK3Q13003 919 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 TRIM29Q14134 588 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 NKD2Q969F2 451 aaPredicted RBP11.85□□□□□ -0.51
UBP1-211ENST00000490112 CPB2Q96IY4 423 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 PRIMPOLQ96LW4 560 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 SMOC2Q9H3U7 446 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 TTC12Q9H892 705 aaPredicted RBP11.85□□□□□ -0.51
UBP1-211ENST00000490112 XPNPEP1Q9NQW7 623 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 KIAA1468Q9P260 1216 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 EPS15L1Q9UBC2 864 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 ADAM28Q9UKQ2 775 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 TPCN1Q9ULQ1 816 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 ZFP37Q9Y6Q3 630 aaPredicted RBP11.85□□□□□ -0.51
UBP1-211ENST00000490112 CLUHO75153 1309 aa11.85□□□□□ -0.51
UBP1-211ENST00000490112 FRYLO94915 3013 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 TDRD15B5MCY1 1934 aaKnown RBP11.84□□□□□ -0.51
UBP1-211ENST00000490112 A0A1B0GUA9 196 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 PRR23AA6NEV1 266 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 ZBTB39O15060 712 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 TADA2AO75478 443 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 ARF4P18085 180 aaPredicted RBP11.84□□□□□ -0.51
UBP1-211ENST00000490112 RFX1P22670 979 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 RARRES1P49788 294 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 NR5A1Q13285 461 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 CAPSQ13938 189 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 LAPTM4AQ15012 233 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 AMHR2Q16671 573 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 TAS1R1Q7RTX1 841 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 ZBTB8OSQ8IWT0 167 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 CCDC105Q8IYK2 499 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 SIX5Q8N196 739 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 MCPH1Q8NEM0 835 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 SMG7Q92540 1137 aaKnown RBP11.84□□□□□ -0.51
UBP1-211ENST00000490112 ZFP42Q96MM3 310 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 PIDD1Q9HB75 910 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 PRMT7Q9NVM4 692 aaPredicted RBP11.84□□□□□ -0.51
UBP1-211ENST00000490112 HES2Q9Y543 173 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 C2orf16Q68DN1 1984 aa11.84□□□□□ -0.51
UBP1-211ENST00000490112 RIF1Q5UIP0 2472 aaKnown RBP11.83□□□□□ -0.52
UBP1-211ENST00000490112 PLXNA3P51805 1871 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 SRFP11831 508 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 GLRA2P23416 452 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 TXKP42681 527 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 EARS2Q5JPH6 523 aaKnown RBP11.83□□□□□ -0.52
UBP1-211ENST00000490112 CWF19L1Q69YN2 538 aaKnown RBP11.83□□□□□ -0.52
UBP1-211ENST00000490112 FUT10Q6P4F1 479 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 PDXDC1Q6P996 788 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 DTWD2Q8NBA8 298 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 ASAP3Q8TDY4 903 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 TNFRSF25Q93038 417 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 APOL6Q9BWW8 343 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 PRKD2Q9BZL6 878 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 NT5C3AQ9H0P0 336 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 C2orf40Q9H1Z8 148 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 SEMA4AQ9H3S1 761 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 NXF3Q9H4D5 531 aaKnown RBP11.83□□□□□ -0.52
UBP1-211ENST00000490112 GJB4Q9NTQ9 266 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 MIOSQ9NXC5 875 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 PARP2Q9UGN5 583 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 SPTBN4Q9H254 2564 aa11.83□□□□□ -0.52
UBP1-211ENST00000490112 PTPRZ1P23471 2315 aaPredicted RBP11.83□□□□□ -0.52
UBP1-211ENST00000490112 SF3B1O75533 1304 aaKnown RBP eCLIP11.83□□□□□ -0.52
UBP1-211ENST00000490112 ZNF292O60281 2723 aa11.82□□□□□ -0.52
UBP1-211ENST00000490112 MTCL1Q9Y4B5 1905 aaKnown RBP11.82□□□□□ -0.52
UBP1-211ENST00000490112 LRRIQ4A6NIV6 560 aa11.82□□□□□ -0.52
UBP1-211ENST00000490112 TGM5O43548 720 aa11.82□□□□□ -0.52
UBP1-211ENST00000490112 RFPL2O75678 378 aa11.82□□□□□ -0.52
UBP1-211ENST00000490112 CTDNEP1O95476 244 aa11.82□□□□□ -0.52
UBP1-211ENST00000490112 NPTXRO95502 500 aa11.82□□□□□ -0.52
UBP1-211ENST00000490112 NPR3P17342 541 aa11.82□□□□□ -0.52
UBP1-211ENST00000490112 AKAP5P24588 427 aa11.82□□□□□ -0.52
UBP1-211ENST00000490112 ELAVL2Q12926 359 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms