RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 GUCY2CP25092 1073 aa13.05□□□□□ -0.32
SRSF4-204ENST00000489898 NPTX2P47972 431 aa13.05□□□□□ -0.32
SRSF4-204ENST00000489898 RNASELQ05823 741 aaKnown RBP13.05□□□□□ -0.32
SRSF4-204ENST00000489898 PTPAQ15257 358 aa13.05□□□□□ -0.32
SRSF4-204ENST00000489898 RILPL1Q5EBL4 403 aa13.05□□□□□ -0.32
SRSF4-204ENST00000489898 FUT10Q6P4F1 479 aa13.05□□□□□ -0.32
SRSF4-204ENST00000489898 ERMNQ8TAM6 284 aa13.05□□□□□ -0.32
SRSF4-204ENST00000489898 EDAQ92838 391 aa13.05□□□□□ -0.32
SRSF4-204ENST00000489898 UBN1Q9NPG3 1134 aa13.05□□□□□ -0.32
SRSF4-204ENST00000489898 SNTG2Q9NY99 539 aa13.05□□□□□ -0.32
SRSF4-204ENST00000489898 ARIH1Q9Y4X5 557 aaPredicted RBP13.05□□□□□ -0.32
SRSF4-204ENST00000489898 GREB1Q4ZG55 1949 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 ADAM12O43184 909 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 ST18O60284 1047 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 SSBP05455 408 aaKnown RBP eCLIP13.04□□□□□ -0.32
SRSF4-204ENST00000489898 ALADP13716 330 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 ZXDAP98168 799 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 TUSC3Q13454 348 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 PTPN21Q16825 1174 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 RARS2Q5T160 578 aaKnown RBP13.04□□□□□ -0.32
SRSF4-204ENST00000489898 LILRA6Q6PI73 481 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 ALKAL1Q6UXT8 129 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 FBXL18Q96ME1 805 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 ZMAT2Q96NC0 199 aaKnown RBP13.04□□□□□ -0.32
SRSF4-204ENST00000489898 ACO2Q99798 780 aaKnown RBP13.04□□□□□ -0.32
SRSF4-204ENST00000489898 C2orf40Q9H1Z8 148 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 DZANK1Q9NVP4 752 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 KANSL3Q9P2N6 904 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 ADAM28Q9UKQ2 775 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 FAN1Q9Y2M0 1017 aa13.04□□□□□ -0.32
SRSF4-204ENST00000489898 CARNS1A5YM72 827 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 CASTOR2A6NHX0 329 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 TMEM189-UBE2V1I3L0A0 370 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 N4BP3O15049 544 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 PDGFBP01127 241 aaPredicted RBP13.03□□□□□ -0.32
SRSF4-204ENST00000489898 SP100P23497 879 aaPredicted RBP13.03□□□□□ -0.32
SRSF4-204ENST00000489898 OR1G1P47890 313 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 GLUD2P49448 558 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 ITIH3Q06033 890 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 RESTQ13127 1097 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 PRPF4BQ13523 1007 aaKnown RBP13.03□□□□□ -0.32
SRSF4-204ENST00000489898 MAPK6Q16659 721 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 RSPO2Q6UXX9 243 aaPredicted RBP13.03□□□□□ -0.32
SRSF4-204ENST00000489898 USP49Q70CQ1 688 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 BMP8AQ7Z5Y6 402 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 GPR149Q86SP6 731 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 ZBTB8OSQ8IWT0 167 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 GPR65Q8IYL9 337 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 TMEM161BQ8NDZ6 487 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 CMASQ8NFW8 434 aaPredicted RBP13.03□□□□□ -0.32
SRSF4-204ENST00000489898 KIFAP3Q92845 792 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 RPGRIP1Q96KN7 1286 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 CCDC43Q96MW1 224 aaKnown RBP13.03□□□□□ -0.32
SRSF4-204ENST00000489898 BACH2Q9BYV9 841 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 RHOBTB2Q9BYZ6 727 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 GOLGA2P5Q9HBQ8 144 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 MAN1C1Q9NR34 630 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 TNFSF13BQ9Y275 285 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 TICRRQ7Z2Z1 1910 aa13.03□□□□□ -0.32
SRSF4-204ENST00000489898 KIAA1549LQ6ZVL6 1849 aa13.02□□□□□ -0.32
SRSF4-204ENST00000489898 NPHP3-ACAD11A0A0J9YXS1 232 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 VWA3AA6NCI4 1184 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 RFPL2O75678 378 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 MAPTP10636 758 aaKnown RBP13.02□□□□□ -0.33
SRSF4-204ENST00000489898 RPL17P18621 184 aaKnown RBP13.02□□□□□ -0.33
SRSF4-204ENST00000489898 ZNF131P52739 623 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 NCKAP1LP55160 1127 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 PEX3P56589 373 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 GIT2Q14161 759 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 HSP90AA2PQ14568 343 aaPredicted RBP13.02□□□□□ -0.33
SRSF4-204ENST00000489898 GLRA4Q5JXX5 417 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 ATF7IP2Q5U623 682 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 ARL6IP4Q66PJ3 421 aaKnown RBP13.02□□□□□ -0.33
SRSF4-204ENST00000489898 SLC39A4Q6P5W5 647 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 POTEHQ6S545 545 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 PRSS55Q6UWB4 352 aaPredicted RBP13.02□□□□□ -0.33
SRSF4-204ENST00000489898 TMC5Q6UXY8 1006 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 TRIM67Q6ZTA4 783 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 SYT2Q8N9I0 419 aaPredicted RBP13.02□□□□□ -0.33
SRSF4-204ENST00000489898 PRSS33Q8NF86 280 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 HASPINQ8TF76 798 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 SNX27Q96L92 541 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 NTPCRQ9BSD7 190 aaKnown RBP13.02□□□□□ -0.33
SRSF4-204ENST00000489898 TMEM134Q9H6X4 195 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 SFXN1Q9H9B4 322 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 FBXW11Q9UKB1 542 aa13.02□□□□□ -0.33
SRSF4-204ENST00000489898 NRG2O14511 850 aaPredicted RBP13.01□□□□□ -0.33
SRSF4-204ENST00000489898 C2CD2LO14523 706 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 ALDH2P05091 517 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 URODP06132 367 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 HOXD11P31277 338 aaPredicted RBP13.01□□□□□ -0.33
SRSF4-204ENST00000489898 GRM5P41594 1212 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 MCM2P49736 904 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 VCPP55072 806 aaKnown RBP13.01□□□□□ -0.33
SRSF4-204ENST00000489898 CACNB1Q02641 598 aaPredicted RBP13.01□□□□□ -0.33
SRSF4-204ENST00000489898 PPP2R5AQ15172 486 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 DCAF4L1Q3SXM0 396 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 TPRNQ4KMQ1 711 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 FAM173BQ6P4H8 233 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 DTHD1Q6ZMT9 781 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms