RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 BLZF1Q9H2G9 400 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 CUEDC2Q9H467 287 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 NLRC4Q9NPP4 1024 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 SAP30BPQ9UHR5 308 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 HAO1Q9UJM8 370 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 STXBP5LQ9Y2K9 1186 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 GDAQ9Y2T3 454 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 ZNF711Q9Y462 761 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 FADS3Q9Y5Q0 445 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 MAST3O60307 1309 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 MYO5AQ9Y4I1 1855 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 MYH1P12882 1939 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 MYH2Q9UKX2 1941 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 PIK3C2BO00750 1634 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 FAM187AA6NFU0 413 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 E9PBE3 544 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF213O14771 459 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 CAPN9O14815 690 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 RASGRF2O14827 1237 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 CBFA2T3O75081 653 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 ZWINTO95229 277 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 CDK4P11802 303 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 ETS2P15036 469 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 ITGA6P23229 1130 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 S100A1P23297 94 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 EPHB2P29323 1055 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 ATP5DP30049 168 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 PPP1R2P41236 205 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 SLC1A4P43007 532 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 MTIF2P46199 727 aaKnown RBP5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 POU5F1Q01860 360 aaKnown RBP5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 GFPT1Q06210 699 aaPredicted RBP5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 KCNMA1Q12791 1236 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 HNRNPDQ14103 355 aaKnown RBP5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 SLC29A2Q14542 456 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 KRT72Q14CN4 511 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 HSP90AA5PQ58FG0 334 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 C10orf76Q5T2E6 689 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 DUPD1Q68J44 220 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 C16orf46Q6P387 395 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 PDXDC1Q6P996 788 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 Q6ZNX1 250 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 RRAGAQ7L523 313 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 DAAM2Q86T65 1068 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 SGMS1Q86VZ5 419 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 EXOC8Q8IYI6 725 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 TRIM22Q8IYM9 498 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 CYP4X1Q8N118 509 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 NUP93Q8N1F7 819 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 BBS5Q8N3I7 341 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 RASGEF1CQ8N431 466 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 CSGALNACT2Q8N6G5 542 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 FNDC8Q8TC99 324 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 ITPKCQ96DU7 683 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 PITPNM3Q9BZ71 974 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 TAOK3Q9H2K8 898 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 CABP5Q9NP86 173 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 KRT82Q9NSB4 513 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 ZDHHC18Q9NUE0 388 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 ARHGEF38Q9NXL2 777 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 HESX1Q9UBX0 185 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 DNAJB4Q9UDY4 337 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF180Q9UJW8 692 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 ANGPTL2Q9UKU9 493 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 TTC7AQ9ULT0 858 aaPredicted RBP5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 SIK3Q9Y2K2 1263 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 STARD13Q9Y3M8 1113 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 C4AP0C0L4 1744 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 C4BP0C0L5 1744 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 RGPD1P0DJD0 1748 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 UMODL1Q5DID0 1318 aa5.09□□□□□ -1.6
SNRNP40-206ENST00000489853 ARHGAP23Q9P227 1491 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 MYO5BQ9ULV0 1848 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 TRIM49BA6NDI0 452 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 A8MXQ7 604 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 WASLO00401 505 aaPredicted RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 DDX3XO00571 662 aaKnown RBP eCLIP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 LSM1O15116 133 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 MAGEB2O15479 319 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 TTI1O43156 1089 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 CCDC22O60826 627 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 TBX10O75333 385 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 SERPINB7O75635 380 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 SERPING1P05155 500 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 CCNE1P24864 410 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 TARSP26639 723 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 HOXA10P31260 410 aaPredicted RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 HALP42357 657 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 TRPC1P48995 793 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 CLCN2P51788 898 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 PMS1P54277 932 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 RPL26P61254 145 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 HAND2P61296 217 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 KLRC3Q07444 240 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 NEXNQ0ZGT2 675 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 ITGA7Q13683 1181 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 GRM2Q14416 872 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 COL19A1Q14993 1142 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 SLC9C1Q4G0N8 1177 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 CGB2Q6NT52 195 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms