RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ANHXE9PGG2 379 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 ZMYND10O75800 440 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 DGAT1O75907 488 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 C1RP00736 705 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 GRIK3Q13003 919 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 NR5A1Q13285 461 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 HTR4Q13639 388 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 PHLDB3Q6NSJ2 640 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 SLC27A1Q6PCB7 646 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 GPR65Q8IYL9 337 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 HASPINQ8TF76 798 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 CCDC43Q96MW1 224 aaKnown RBP18.83■□□□□ 0.6
TOP3B-217ENST00000489581 HSD17B14Q9BPX1 270 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 RPP25Q9BUL9 199 aaKnown RBP18.83■□□□□ 0.6
TOP3B-217ENST00000489581 SEMA4AQ9H3S1 761 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 ARHGEF3Q9NR81 526 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 ANKEF1Q9NU02 776 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 PCDHA12Q9UN75 941 aa18.83■□□□□ 0.6
TOP3B-217ENST00000489581 VWA8A3KMH1 1905 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 A0A1B0GUA9 196 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 EPB41L2O43491 1005 aaKnown RBP18.82■□□□□ 0.6
TOP3B-217ENST00000489581 LYPLA2O95372 231 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 FSHRP23945 695 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 RARRES1P49788 294 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 NTHL1P78549 312 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 RTP2Q5QGT7 225 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 DCLRE1AQ6PJP8 1040 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 MAEAQ7L5Y9 396 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 GRASPQ7Z6J2 395 aaPredicted RBP18.82■□□□□ 0.6
TOP3B-217ENST00000489581 PIGOQ8TEQ8 1089 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 NFKBIZQ9BYH8 718 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 FOXQ1Q9C009 403 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 POLR3FQ9H1D9 316 aaPredicted RBP18.82■□□□□ 0.6
TOP3B-217ENST00000489581 DLGAP2Q9P1A6 1054 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 ORC3Q9UBD5 711 aaPredicted RBP18.82■□□□□ 0.6
TOP3B-217ENST00000489581 CEP250Q9BV73 2442 aa18.82■□□□□ 0.6
TOP3B-217ENST00000489581 CACNA1AO00555 2505 aa18.81■□□□□ 0.6
TOP3B-217ENST00000489581 CTDNEP1O95476 244 aa18.81■□□□□ 0.6
TOP3B-217ENST00000489581 GPC5P78333 572 aa18.81■□□□□ 0.6
TOP3B-217ENST00000489581 CREMQ03060 361 aa18.81■□□□□ 0.6
TOP3B-217ENST00000489581 HSP90AA2PQ14568 343 aaPredicted RBP18.81■□□□□ 0.6
TOP3B-217ENST00000489581 CEP57Q86XR8 500 aa18.81■□□□□ 0.6
TOP3B-217ENST00000489581 C1orf210Q8IVY1 113 aa18.81■□□□□ 0.6
TOP3B-217ENST00000489581 KIAA2013Q8IYS2 634 aa18.81■□□□□ 0.6
TOP3B-217ENST00000489581 TTC12Q9H892 705 aaPredicted RBP18.81■□□□□ 0.6
TOP3B-217ENST00000489581 GPRC5CQ9NQ84 441 aa18.81■□□□□ 0.6
TOP3B-217ENST00000489581 SLC2A4RGQ9NR83 387 aa18.81■□□□□ 0.6
TOP3B-217ENST00000489581 TPCN1Q9ULQ1 816 aa18.81■□□□□ 0.6
TOP3B-217ENST00000489581 SF3B1O75533 1304 aaKnown RBP eCLIP18.8■□□□□ 0.62e-6■■■■■ 43.1
TOP3B-217ENST00000489581 NOTCH4Q99466 2003 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 CASTOR2A6NHX0 329 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 LRRIQ4A6NIV6 560 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 USO1O60763 962 aaKnown RBP18.8■□□□□ 0.6
TOP3B-217ENST00000489581 PFKFB2O60825 505 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 LRRN2O75325 713 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 SP9P0CG40 484 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 GLULP15104 373 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 KRT2P35908 639 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 TXKP42681 527 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 TUSC3Q13454 348 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 CALCRLQ16602 461 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 PARM1Q6UWI2 310 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 FGF14Q92915 247 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 TNFRSF25Q93038 417 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 CLSTN3Q9BQT9 956 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 TTPALQ9BTX7 342 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 FBXW11Q9UKB1 542 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 DMXL1Q9Y485 3027 aa18.8■□□□□ 0.6
TOP3B-217ENST00000489581 GPR179Q6PRD1 2367 aa18.79■□□□□ 0.6
TOP3B-217ENST00000489581 FAM171A1Q5VUB5 890 aa18.79■□□□□ 0.6
TOP3B-217ENST00000489581 PJA1Q8NG27 643 aa18.79■□□□□ 0.6
TOP3B-217ENST00000489581 RMDN1Q96DB5 314 aa18.79■□□□□ 0.6
TOP3B-217ENST00000489581 HINFPQ9BQA5 517 aa18.79■□□□□ 0.6
TOP3B-217ENST00000489581 CDH7Q9ULB5 785 aa18.79■□□□□ 0.6
TOP3B-217ENST00000489581 POLIQ9UNA4 740 aa18.79■□□□□ 0.6
TOP3B-217ENST00000489581 ZFP37Q9Y6Q3 630 aaPredicted RBP18.79■□□□□ 0.6
TOP3B-217ENST00000489581 COL4A3Q01955 1670 aa18.79■□□□□ 0.6
TOP3B-217ENST00000489581 POTEMA6NI47 508 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 TTLL13PA6NNM8 815 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 WNT7AO00755 349 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 CCL16O15467 120 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 ADAM12O43184 909 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 KIF4AO95239 1232 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 STARD6P59095 220 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 SNW1Q13573 536 aaKnown RBP18.78■□□□□ 0.6
TOP3B-217ENST00000489581 PSMD5Q16401 504 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 PPM1LQ5SGD2 360 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 LIN9Q5TKA1 542 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 ZC3H14Q6PJT7 736 aaKnown RBP18.78■□□□□ 0.6
TOP3B-217ENST00000489581 LNX1Q8TBB1 728 aaPredicted RBP18.78■□□□□ 0.6
TOP3B-217ENST00000489581 PIK3R5Q8WYR1 880 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 WASF1Q92558 559 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 CXCL16Q9H2A7 254 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 BRMS1Q9HCU9 246 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 SNTG2Q9NY99 539 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 ZMYM2Q9UBW7 1377 aa18.78■□□□□ 0.6
TOP3B-217ENST00000489581 PTGESO14684 152 aa18.77■□□□□ 0.6
TOP3B-217ENST00000489581 THP07101 528 aa18.77■□□□□ 0.6
TOP3B-217ENST00000489581 C8AP07357 584 aa18.77■□□□□ 0.6
TOP3B-217ENST00000489581 HNRNPA1P09651 372 aaKnown RBP eCLIP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms