RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 LIN9Q5TKA1 542 aa13.2□□□□□ -0.3
SFXN3-207ENST00000489434 PDXDC1Q6P996 788 aa13.2□□□□□ -0.3
SFXN3-207ENST00000489434 GET4Q7L5D6 327 aaPredicted RBP13.2□□□□□ -0.3
SFXN3-207ENST00000489434 GLYCTKQ8IVS8 523 aa13.2□□□□□ -0.3
SFXN3-207ENST00000489434 TNFRSF25Q93038 417 aa13.2□□□□□ -0.3
SFXN3-207ENST00000489434 ZNF707Q96C28 371 aaPredicted RBP13.2□□□□□ -0.3
SFXN3-207ENST00000489434 MYADMQ96S97 322 aa13.2□□□□□ -0.3
SFXN3-207ENST00000489434 ADPGKQ9BRR6 497 aa13.2□□□□□ -0.3
SFXN3-207ENST00000489434 C2orf40Q9H1Z8 148 aa13.2□□□□□ -0.3
SFXN3-207ENST00000489434 SEMA4AQ9H3S1 761 aa13.2□□□□□ -0.3
SFXN3-207ENST00000489434 DAXXQ9UER7 740 aaPredicted RBP13.2□□□□□ -0.3
SFXN3-207ENST00000489434 N4BP3O15049 544 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 ZMYND10O75800 440 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 PAPLNO95428 1278 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 LAMP2P13473 410 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 RPL17P18621 184 aaKnown RBP13.19□□□□□ -0.3
SFXN3-207ENST00000489434 ATP2B1P20020 1258 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 FSHRP23945 695 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 TUSC3Q13454 348 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 SAFBQ15424 915 aaKnown RBP eCLIP13.19□□□□□ -0.3
SFXN3-207ENST00000489434 MAPK6Q16659 721 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 LILRA6Q6PI73 481 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 PPP4R3CPQ6ZMV5 832 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 MAEAQ7L5Y9 396 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 CDR2LQ86X02 465 aaPredicted RBP13.19□□□□□ -0.3
SFXN3-207ENST00000489434 DIS3L2Q8IYB7 885 aaKnown RBP13.19□□□□□ -0.3
SFXN3-207ENST00000489434 ADSSL1Q8N142 457 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 NECAB1Q8N987 351 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 GSTCDQ8NEC7 633 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 ERMNQ8TAM6 284 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 KCNG4Q8TDN1 519 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 GTF3C6Q969F1 213 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 SHDQ96IW2 340 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 NACC1Q96RE7 527 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 TTPALQ9BTX7 342 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 TBC1D17Q9HA65 648 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 TUFT1Q9NNX1 390 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 CA14Q9ULX7 337 aa13.19□□□□□ -0.3
SFXN3-207ENST00000489434 FRYLO94915 3013 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 BTBD18B2RXH4 712 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 EIF5BO60841 1220 aaKnown RBP13.18□□□□□ -0.3
SFXN3-207ENST00000489434 DTNBO60941 627 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 XYLBO75191 536 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 THP07101 528 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 HNRNPA1P09651 372 aaKnown RBP eCLIP13.18□□□□□ -0.3
SFXN3-207ENST00000489434 FDPSP14324 419 aaKnown RBP13.18□□□□□ -0.3
SFXN3-207ENST00000489434 PRPF4BQ13523 1007 aaKnown RBP13.18□□□□□ -0.3
SFXN3-207ENST00000489434 PPP2R5AQ15172 486 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 FAM187BQ17R55 369 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 FAM171A1Q5VUB5 890 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 PHLDB3Q6NSJ2 640 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 APBB1IPQ7Z5R6 666 aaPredicted RBP13.18□□□□□ -0.3
SFXN3-207ENST00000489434 CEP57Q86XR8 500 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 RABGGTAQ92696 567 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 MTMR9Q96QG7 549 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 ARHGEF3Q9NR81 526 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 SIT1Q9Y3P8 196 aa13.18□□□□□ -0.3
SFXN3-207ENST00000489434 KRBA1A5PL33 1030 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 ARHGEF35A5YM69 484 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 CASTOR2A6NHX0 329 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 POTEMA6NI47 508 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 ANHXE9PGG2 379 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 MCM7P33993 719 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 HTR4Q13639 388 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 PSMD5Q16401 504 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 RTP2Q5QGT7 225 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 PPM1LQ5SGD2 360 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 CDCA2Q69YH5 1023 aaPredicted RBP13.17□□□□□ -0.3
SFXN3-207ENST00000489434 DCLRE1AQ6PJP8 1040 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 ZC3H14Q6PJT7 736 aaKnown RBP13.17□□□□□ -0.3
SFXN3-207ENST00000489434 PRSS55Q6UWB4 352 aaPredicted RBP13.17□□□□□ -0.3
SFXN3-207ENST00000489434 MTSS1LQ765P7 747 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 DEPTORQ8TB45 409 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 GPR152Q8TDT2 470 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 PIK3R5Q8WYR1 880 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 FZD8Q9H461 694 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 GPRC5CQ9NQ84 441 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 SLC2A4RGQ9NR83 387 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 FBXW11Q9UKB1 542 aa13.17□□□□□ -0.3
SFXN3-207ENST00000489434 DMDP11532 3685 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 A0A087WWV3 80 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 RECQL4O94761 1208 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 KIF4AO95239 1232 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 LMNAP02545 664 aaKnown RBP13.16□□□□□ -0.3
SFXN3-207ENST00000489434 PRKCBP05771 671 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 SPATA31C1P0DKV0 1188 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 LIG1P18858 919 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 HOXA9P31269 272 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 EFNA5P52803 228 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 FOSBP53539 338 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 ME3Q16798 604 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 DCAF4L1Q3SXM0 396 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 ERMP1Q7Z2K6 904 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 GRASPQ7Z6J2 395 aaPredicted RBP13.16□□□□□ -0.3
SFXN3-207ENST00000489434 CATSPER3Q86XQ3 398 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 NSUN7Q8NE18 718 aaKnown RBP13.16□□□□□ -0.3
SFXN3-207ENST00000489434 HASPINQ8TF76 798 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 IFT74Q96LB3 600 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 PAAF1Q9BRP4 392 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms