RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 OTUD6BQ8N6M0 293 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 PPM1EQ8WY54 764 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 ZNF668Q96K58 619 aaPredicted RBP13.62□□□□□ -0.23
CLIC4-202ENST00000488683 ZBTB45Q96K62 511 aaPredicted RBP13.62□□□□□ -0.23
CLIC4-202ENST00000488683 FAM114A2Q9NRY5 505 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 DDX20Q9UHI6 824 aaKnown RBP13.62□□□□□ -0.23
CLIC4-202ENST00000488683 KIAA1217Q5T5P2 1943 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 BRCA2P51587 3418 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 A0A087WUV0 522 aaPredicted RBP13.61□□□□□ -0.23
CLIC4-202ENST00000488683 CYP11B1P15538 503 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 PMS2P54278 862 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 NCKAP1LP55160 1127 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 PPP2R2AP63151 447 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 TNIP1Q15025 636 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 ARHGEF16Q5VV41 709 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 SWSAP1Q6NVH7 229 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 FAM71AQ8IYT1 594 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 TTLL6Q8N841 843 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 TMEM161BQ8NDZ6 487 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 ZNF526Q8TF50 670 aaPredicted RBP13.61□□□□□ -0.23
CLIC4-202ENST00000488683 CEP170P1Q96L14 293 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 RPAP3Q9H6T3 665 aaPredicted RBP13.61□□□□□ -0.23
CLIC4-202ENST00000488683 SLC38A10Q9HBR0 1119 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 CHST7Q9NS84 486 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 TBX20Q9UMR3 447 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 ACSL3O95573 720 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 PSMC4P43686 418 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 HADHBP55084 474 aaKnown RBP13.61□□□□□ -0.23
CLIC4-202ENST00000488683 MAP3K10Q02779 954 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 CETN1Q12798 172 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 HP1BP3Q5SSJ5 553 aaPredicted RBP13.61□□□□□ -0.23
CLIC4-202ENST00000488683 FKBP1CQ5VVH2 108 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 C11orf63Q6NUN7 778 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 KCNV1Q6PIU1 500 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 NIPA1Q7RTP0 329 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 HELQQ8TDG4 1101 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 TMEM174Q8WUU8 243 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 BICD1Q96G01 975 aa13.61□□□□□ -0.23
CLIC4-202ENST00000488683 ZBED3Q96IU2 234 aaPredicted RBP13.61□□□□□ -0.23
CLIC4-202ENST00000488683 P4HA2O15460 535 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 PPFIA2O75334 1257 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 LYPLA2O95372 231 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 KCNA3P22001 575 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 CHKAP35790 457 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 PTPRJQ12913 1337 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 ALCAMQ13740 583 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 LONRF1Q17RB8 773 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 SV2AQ7L0J3 742 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 PARD3BQ8TEW8 1205 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 ZNF516Q92618 1163 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 ACSF2Q96CM8 615 aaPredicted RBP13.6□□□□□ -0.23
CLIC4-202ENST00000488683 PSMD1Q99460 953 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 KMT5AQ9NQR1 393 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 DIS3Q9Y2L1 958 aaKnown RBP13.6□□□□□ -0.23
CLIC4-202ENST00000488683 A6NNZ2 444 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 H0YHG0 523 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 HNRNPDLO14979 420 aaKnown RBP13.6□□□□□ -0.23
CLIC4-202ENST00000488683 WDR46O15213 610 aaKnown RBP13.6□□□□□ -0.23
CLIC4-202ENST00000488683 RTN2O75298 545 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 CHN1P15882 459 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 GHRHRQ02643 423 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 BYSLQ13895 437 aaKnown RBP13.6□□□□□ -0.23
CLIC4-202ENST00000488683 TUBB8Q3ZCM7 444 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 NBPF12Q5TAG4 269 aaPredicted RBP13.6□□□□□ -0.23
CLIC4-202ENST00000488683 RNF207Q6ZRF8 634 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 ANKS1BQ7Z6G8 1248 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 FMNL3Q8IVF7 1028 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 C4orf19Q8IY42 314 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 TMEM143Q96AN5 459 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 PDCD2LQ9BRP1 358 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 RAB17Q9H0T7 212 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 ST6GALNAC4Q9H4F1 302 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 USTQ9Y2C2 406 aa13.6□□□□□ -0.23
CLIC4-202ENST00000488683 R3HDM2Q9Y2K5 976 aaKnown RBP13.6□□□□□ -0.23
CLIC4-202ENST00000488683 CTDP1Q9Y5B0 961 aaPredicted RBP13.6□□□□□ -0.23
CLIC4-202ENST00000488683 GOLGA6L10A0A0M3HER8 536 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 MEFVO15553 781 aaPredicted RBP13.59□□□□□ -0.23
CLIC4-202ENST00000488683 MTM1Q13496 603 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 MTMR3Q13615 1198 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 MTERF2Q49AM1 385 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 MCF2L2Q86YR7 1114 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 SHC3Q92529 594 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 CD101Q93033 1021 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 TEPSINQ96N21 525 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 MYOZ2Q9NPC6 264 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 SEPT9Q9UHD8 586 aaPredicted RBP13.59□□□□□ -0.23
CLIC4-202ENST00000488683 ANAPC7Q9UJX3 599 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 UMODL1Q5DID0 1318 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 SYNGAP1Q96PV0 1343 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 GMNCA6NCL1 334 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 PHF2O75151 1096 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 RGS20O76081 388 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 KIAA0754O94854 1291 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 FAM107AO95990 144 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 RRM1P23921 792 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 SSR1P43307 286 aaKnown RBP13.59□□□□□ -0.23
CLIC4-202ENST00000488683 PSMC5P62195 406 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 ATP13A4Q4VNC1 1196 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 RTKN2Q8IZC4 609 aa13.59□□□□□ -0.23
CLIC4-202ENST00000488683 MTMR14Q8NCE2 650 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms