RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 EPHX3Q9H6B9 360 aa19.5■□□□□ 0.71
ITGB1-215ENST00000488494 MRPL17Q9NRX2 175 aaKnown RBP19.5■□□□□ 0.71
ITGB1-215ENST00000488494 RBM19Q9Y4C8 960 aaKnown RBP19.5■□□□□ 0.71
ITGB1-215ENST00000488494 STX6O43752 255 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 HOXB8P17481 243 aaPredicted RBP19.49■□□□□ 0.71
ITGB1-215ENST00000488494 GLUD2P49448 558 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 TUSC3Q13454 348 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 TPRNQ4KMQ1 711 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 ARSHQ5FYA8 562 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 TAS1R1Q7RTX1 841 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 RNF168Q8IYW5 571 aaPredicted RBP19.49■□□□□ 0.71
ITGB1-215ENST00000488494 CEP120Q8N960 986 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 TMEM161BQ8NDZ6 487 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 RAD54LQ92698 747 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 REEP2Q9BRK0 252 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 PAAF1Q9BRP4 392 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 COLEC11Q9BWP8 271 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 EMILIN2Q9BXX0 1053 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 BLOC1S4Q9NUP1 217 aa19.49■□□□□ 0.71
ITGB1-215ENST00000488494 FBXO2Q9UK22 296 aaPredicted RBP19.49■□□□□ 0.71
ITGB1-215ENST00000488494 EFEMP2O95967 443 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 CNPP09543 421 aaKnown RBP19.48■□□□□ 0.71
ITGB1-215ENST00000488494 MAPTP10636 758 aaKnown RBP19.48■□□□□ 0.71
ITGB1-215ENST00000488494 STRN3Q13033 797 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 MCM6Q14566 821 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 HSP90AA2PQ14568 343 aaPredicted RBP19.48■□□□□ 0.71
ITGB1-215ENST00000488494 CBX2Q14781 532 aaPredicted RBP19.48■□□□□ 0.71
ITGB1-215ENST00000488494 GLRA4Q5JXX5 417 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 SPECC1Q5M775 1068 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 FUT10Q6P4F1 479 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 ZBTB33Q86T24 672 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 HASPINQ8TF76 798 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 SLC22A17Q8WUG5 538 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 EPSTI1Q96J88 318 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 B3GALT6Q96L58 329 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 C1QTNF1Q9BXJ1 281 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 DZANK1Q9NVP4 752 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 ANKFY1Q9P2R3 1169 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 CDH22Q9UJ99 828 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 ADAM28Q9UKQ2 775 aa19.48■□□□□ 0.71
ITGB1-215ENST00000488494 MYH15Q9Y2K3 1946 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 KIF4AO95239 1232 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 THP07101 528 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 HARSP12081 509 aaKnown RBP19.47■□□□□ 0.71
ITGB1-215ENST00000488494 GRM5P41594 1212 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 SMTNP53814 917 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 OSTNP61366 133 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 NAB2Q15742 525 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 RARS2Q5T160 578 aaKnown RBP19.47■□□□□ 0.71
ITGB1-215ENST00000488494 MPZL3Q6UWV2 235 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 USP49Q70CQ1 688 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 PPFIBP1Q86W92 1011 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 KLHL5Q96PQ7 755 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 USP28Q96RU2 1077 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 NTPCRQ9BSD7 190 aaKnown RBP19.47■□□□□ 0.71
ITGB1-215ENST00000488494 CCDC94Q9BW85 323 aaPredicted RBP19.47■□□□□ 0.71
ITGB1-215ENST00000488494 PHF7Q9BWX1 381 aaPredicted RBP19.47■□□□□ 0.71
ITGB1-215ENST00000488494 GPR62Q9BZJ7 368 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 PTPRHQ9HD43 1115 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 ODF2LQ9ULJ1 636 aa19.47■□□□□ 0.71
ITGB1-215ENST00000488494 SF3B1O75533 1304 aaKnown RBP eCLIP19.47■□□□□ 0.712e-9■■■■■ 80.4
ITGB1-215ENST00000488494 MYH11P35749 1972 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 FAM86C2PA6NEL3 165 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 PI4K2BG5E9Z4 385 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 ABLIM1O14639 778 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 LILRB3O75022 631 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 KRT18P05783 430 aaKnown RBP19.46■□□□□ 0.71
ITGB1-215ENST00000488494 MCF2P10911 925 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 PROZP22891 400 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 KLRC2P26717 231 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 CLCN4P51793 760 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 DSG1Q02413 1049 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 KIAA1841Q6NSI8 718 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 C12orf76Q8N812 135 aaPredicted RBP19.46■□□□□ 0.71
ITGB1-215ENST00000488494 LARP4BQ92615 738 aaKnown RBP19.46■□□□□ 0.71
ITGB1-215ENST00000488494 CLIC6Q96NY7 704 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 TCHPQ9BT92 498 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 CCSER1Q9C0I3 900 aa19.46■□□□□ 0.71
ITGB1-215ENST00000488494 ZSCAN16Q9H4T2 348 aaPredicted RBP19.46■□□□□ 0.71
ITGB1-215ENST00000488494 LARSQ9P2J5 1176 aaKnown RBP19.46■□□□□ 0.71
ITGB1-215ENST00000488494 DAXXQ9UER7 740 aaPredicted RBP19.46■□□□□ 0.71
ITGB1-215ENST00000488494 SRPRBQ9Y5M8 271 aaKnown RBP19.46■□□□□ 0.71
ITGB1-215ENST00000488494 TRIOO75962 3097 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 SPDYE4A6NLX3 237 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 K7ENM7 598 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 TEX28O15482 410 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 DCXO43602 365 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 TBCAO75347 108 aaKnown RBP19.45■□□□□ 0.7
ITGB1-215ENST00000488494 FAM13AO94988 1023 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 HSP90AA1P07900 732 aaKnown RBP19.45■□□□□ 0.7
ITGB1-215ENST00000488494 YARSP54577 528 aaKnown RBP19.45■□□□□ 0.7
ITGB1-215ENST00000488494 NCKAP1LP55160 1127 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 ITIH3Q06033 890 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 NOLC1Q14978 699 aaKnown RBP eCLIP19.45■□□□□ 0.7
ITGB1-215ENST00000488494 CES5AQ6NT32 575 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 RPGRIP1Q96KN7 1286 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 FBXL18Q96ME1 805 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 PPP1R10Q96QC0 940 aaKnown RBP19.45■□□□□ 0.7
ITGB1-215ENST00000488494 ADAM7Q9H2U9 754 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 TOPORSQ9NS56 1045 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms