RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 SNAP47Q5SQN1 464 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 UTP14CQ5TAP6 766 aaKnown RBP6.78□□□□□ -1.32
CDHR3-213ENST00000488386 WWC2Q6AWC2 1192 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 TMTC3Q6ZXV5 915 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 HEATR3Q7Z4Q2 680 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 VSIG10LQ86VR7 867 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 FANCBQ8NB91 859 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 GOLM1Q8NBJ4 401 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 SHKBP1Q8TBC3 707 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 DHX38Q92620 1227 aaKnown RBP6.78□□□□□ -1.32
CDHR3-213ENST00000488386 SPATA33Q96N06 139 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 JAKMIP1Q96N16 626 aaKnown RBP6.78□□□□□ -1.32
CDHR3-213ENST00000488386 SPZ1Q9BXG8 430 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 NKX2-4Q9H2Z4 354 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 METTL5Q9NRN9 209 aaKnown RBP6.78□□□□□ -1.32
CDHR3-213ENST00000488386 TMEM260Q9NX78 707 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 HDAC6Q9UBN7 1215 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 SEC63Q9UGP8 760 aaKnown RBP6.78□□□□□ -1.32
CDHR3-213ENST00000488386 YBX2Q9Y2T7 364 aaKnown RBP6.78□□□□□ -1.32
CDHR3-213ENST00000488386 SNX14Q9Y5W7 946 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.77□□□□□ -1.33
CDHR3-213ENST00000488386 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.77□□□□□ -1.33
CDHR3-213ENST00000488386 FAM170BA6NMN3 283 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 GOLGA8AA7E2F4 631 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 GOLGA8BA8MQT2 603 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 SCAMP3O14828 347 aaKnown RBP6.77□□□□□ -1.33
CDHR3-213ENST00000488386 ATP9AO75110 1047 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 FGBP02675 491 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 CASTP20810 708 aaKnown RBP6.77□□□□□ -1.33
CDHR3-213ENST00000488386 KIF5BP33176 963 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 SMAD3P84022 425 aaKnown RBP6.77□□□□□ -1.33
CDHR3-213ENST00000488386 GPNMBQ14956 572 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 DGKDQ16760 1214 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 KIAA0753Q2KHM9 967 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 BRDTQ58F21 947 aaPredicted RBP6.77□□□□□ -1.33
CDHR3-213ENST00000488386 CELF3Q5SZQ8 465 aaKnown RBP6.77□□□□□ -1.33
CDHR3-213ENST00000488386 APOA5Q6Q788 366 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 Q6ZUG5 572 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 HDXQ7Z353 690 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 SPRED2Q7Z698 418 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 ZAR1Q86SH2 424 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 SLC17A8Q8NDX2 589 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 GATAD2BQ8WXI9 593 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 PPM1EQ8WY54 764 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 TIFAQ96CG3 184 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 PSMG3-AS1Q96PY0 264 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 CERS4Q9HA82 394 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 MLXIPQ9HAP2 919 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 STXBP5LQ9Y2K9 1186 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 CORINQ9Y5Q5 1042 aa6.77□□□□□ -1.33
CDHR3-213ENST00000488386 FRMPD4Q14CM0 1322 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 RFXAPO00287 272 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 FANCGO15287 622 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 ZBTB43O43298 467 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 F2P00734 622 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 TGFB1P01137 390 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 LGALS2P05162 132 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 IQCF3P0C7M6 154 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 HSPA4P34932 840 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 EIF4A3P38919 411 aaKnown RBP6.76□□□□□ -1.33
CDHR3-213ENST00000488386 RPL6Q02878 288 aaKnown RBP6.76□□□□□ -1.33
CDHR3-213ENST00000488386 NKG7Q16617 165 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 NFRKBQ6P4R8 1299 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 PSRC1Q6PGN9 363 aaPredicted RBP6.76□□□□□ -1.33
CDHR3-213ENST00000488386 SYNE3Q6ZMZ3 975 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 SGMS1Q86VZ5 419 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 C7orf31Q8N865 590 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 USP38Q8NB14 1042 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 PPTC7Q8NI37 304 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 CYP2W1Q8TAV3 490 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 HERVK_113Q902F9 699 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 BRF1Q92994 677 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 CUL5Q93034 780 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 RNF34Q969K3 372 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 ZBTB10Q96DT7 871 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 TBC1D32Q96NH3 1257 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 MAP3K14Q99558 947 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 C16orf70Q9BSU1 422 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 FTOQ9C0B1 505 aaKnown RBP eCLIP6.76□□□□□ -1.33
CDHR3-213ENST00000488386 WNT10AQ9GZT5 417 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 PRDM12Q9H4Q4 367 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 PSTPIP2Q9H939 334 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 GTF2IRD1Q9UHL9 959 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 PCDHA6Q9UN73 950 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 POLR3KQ9Y2Y1 108 aaPredicted RBP6.76□□□□□ -1.33
CDHR3-213ENST00000488386 PCDHA8Q9Y5H6 950 aa6.76□□□□□ -1.33
CDHR3-213ENST00000488386 PRR19A6NJB7 356 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 WDR64B1ANS9 1081 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 DDX39AO00148 427 aaKnown RBP6.75□□□□□ -1.33
CDHR3-213ENST00000488386 STXBP3O00186 592 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 HAS3O00219 553 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 NOP56O00567 594 aaKnown RBP6.75□□□□□ -1.33
CDHR3-213ENST00000488386 GSC2O15499 205 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 GREM1O60565 184 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 KPNA6O60684 536 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 NBNO60934 754 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 SUPT20HL2P0C7V6 817 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 SMIM10L2AP0DMW4 78 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 SMIM10L2BP0DMW5 78 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 CALM1P0DP23 149 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms