RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 ARHGEF37A1IGU5 675 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 ERICH2A1L162 156 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 LCHNA4D1U4 455 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 ANKRD62A6NC57 917 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 C2orf71A6NGG8 1288 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 MEIS1O00470 390 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 FGAP02671 866 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 RLBP1P12271 317 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 PCSK2P16519 638 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 NDUFV1P49821 464 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 EVCP57679 992 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 SMARCB1Q12824 385 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 CAMK1Q14012 370 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 LRRC32Q14392 662 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 HSP90AA2PQ14568 343 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 KARSQ15046 597 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 TARBP2Q15633 366 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 DGKKQ5KSL6 1271 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 ATAT1Q5SQI0 421 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 MARCH8Q5T0T0 291 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 SYCE2Q6PIF2 218 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 XKR5Q6UX68 686 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 B3GNT9Q6UX72 402 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 ABHD15Q6UXT9 468 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 NOL8Q76FK4 1167 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 CATIPQ7Z7H3 387 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 ECHDC2Q86YB7 292 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 CPXCR1Q8N123 301 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 MEIOBQ8N635 442 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 ENAHQ8N8S7 591 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 URGCPQ8TCY9 931 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 TCP11Q8WWU5 503 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 RUBCNQ92622 972 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 ATOH1Q92858 354 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 NUP88Q99567 741 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 ADAMTS10Q9H324 1103 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 AZI2Q9H6S1 392 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 BCAS3Q9H6U6 928 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 C8orf33Q9H7E9 229 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 TLE6Q9H808 572 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 AGO4Q9HCK5 861 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 JPH1Q9HDC5 661 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 WDR6Q9NNW5 1121 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 CD320Q9NPF0 282 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 CLDND1Q9NY35 253 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 GDE1Q9NZC3 331 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 COL20A1Q9P218 1284 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 SLC9A2Q9UBY0 812 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 HCN2Q9UL51 889 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 GIT1Q9Y2X7 761 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 BACE2Q9Y5Z0 518 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 MIA3Q5JRA6 1907 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 IPO5O00410 1097 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 GRM6O15303 877 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 GPR32O75388 356 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 FGF18O76093 207 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 C22orf31O95567 290 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 PSAPP07602 524 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 FAM163BP0C2L3 166 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 SFPQP23246 707 aaKnown RBP eCLIP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 DDX6P26196 483 aaKnown RBP eCLIP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 CALML3P27482 149 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 PDE1AP54750 535 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 EPHA5P54756 1037 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 DSG1Q02413 1049 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 ARID5AQ03989 594 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 TROAPQ12815 778 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 IKQ13123 557 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 PLCB4Q15147 1175 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 FAM47CQ5HY64 1035 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 IFIT1BQ5T764 474 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 PEAR1Q5VY43 1037 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 AGMOQ6ZNB7 445 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 JAZF1Q86VZ6 243 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 FAM9BQ8IZU0 186 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 CCDC148Q8NFR7 591 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 POF1BQ8WVV4 589 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 LENG1Q96BZ8 264 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 NSUN5Q96P11 429 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 UBAC1Q9BSL1 405 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 SRRTQ9BXP5 876 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 GRIP2Q9C0E4 1043 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 NRBP2Q9NSY0 501 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 UBP1Q9NZI7 540 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 RCAN3Q9UKA8 241 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 TPCN1Q9ULQ1 816 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 TPX2Q9ULW0 747 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 ZNF862O60290 1169 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 KINO60870 393 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 EPN2O95208 641 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 SOD2P04179 222 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 RETP07949 1114 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CELA3AP09093 270 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 SLURP2P0DP57 97 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 SDSP20132 328 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 PMLP29590 882 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ETFBP38117 255 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 MRPS9P82933 396 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 NUCB1Q02818 461 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms