RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 CDC23Q9UJX2 597 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 NAGPAQ9UK23 515 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 GUCA1BQ9UMX6 200 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 MRFAP1Q9Y605 127 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 CNTNAP2Q9UHC6 1331 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 A0A087X0T9 212 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 A0A0U1RQJ8 604 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 SMIM35A0A1B0GVV1 85 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 MBLAC1A4D2B0 266 aaPredicted RBP12.57□□□□□ -0.4
PRKCB-207ENST00000486868 DYNC1LI2O43237 492 aaPredicted RBP12.57□□□□□ -0.4
PRKCB-207ENST00000486868 URI1O94763 535 aaPredicted RBP12.57□□□□□ -0.4
PRKCB-207ENST00000486868 TOMM70O94826 608 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 FAM228BP0C875 321 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 AKR1A1P14550 325 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 CLCN3P51790 818 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 MAP2K1Q02750 393 aaPredicted RBP12.57□□□□□ -0.4
PRKCB-207ENST00000486868 GFPT1Q06210 699 aaPredicted RBP12.57□□□□□ -0.4
PRKCB-207ENST00000486868 PRPF4BQ13523 1007 aaKnown RBP12.57□□□□□ -0.4
PRKCB-207ENST00000486868 WHAMMP3Q1A5X7 153 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 ATF7IP2Q5U623 682 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 ALKBH5Q6P6C2 394 aaKnown RBP12.57□□□□□ -0.4
PRKCB-207ENST00000486868 METTL13Q8N6R0 699 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 HELQQ8TDG4 1101 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 ATRIPQ8WXE1 791 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 ZBTB45Q96K62 511 aaPredicted RBP12.57□□□□□ -0.4
PRKCB-207ENST00000486868 NOX5Q96PH1 765 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 ALS2CR12Q96Q35 445 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 IRX2Q9BZI1 471 aaPredicted RBP12.57□□□□□ -0.4
PRKCB-207ENST00000486868 AP5M1Q9H0R1 490 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 IFT122Q9HBG6 1241 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 FLRT1Q9NZU1 646 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 TSKSQ9UJT2 592 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 AJAP1Q9UKB5 411 aaPredicted RBP12.57□□□□□ -0.4
PRKCB-207ENST00000486868 CPSF3Q9UKF6 684 aaKnown RBP12.57□□□□□ -0.4
PRKCB-207ENST00000486868 ABT1Q9ULW3 272 aaKnown RBP12.57□□□□□ -0.4
PRKCB-207ENST00000486868 JRKLQ9Y4A0 524 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 SIP14410 1827 aa12.57□□□□□ -0.4
PRKCB-207ENST00000486868 FOXN3O00409 490 aaPredicted RBP12.56□□□□□ -0.4
PRKCB-207ENST00000486868 B4GALT4O60513 344 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 DUSP11O75319 330 aaKnown RBP12.56□□□□□ -0.4
PRKCB-207ENST00000486868 IL18RAPO95256 599 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 EDN1P05305 212 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 DLATP10515 647 aaKnown RBP12.56□□□□□ -0.4
PRKCB-207ENST00000486868 MCF2P10911 925 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 GZMAP12544 262 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 BPIFB4P59827 614 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 ADAM17P78536 824 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 AMPD2Q01433 879 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 TCEAL1Q15170 157 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 WDR44Q5JSH3 913 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 MARCH8Q5T0T0 291 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 MFSD14CQ5VZR4 134 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 GJB7Q6PEY0 223 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 APBB1IPQ7Z5R6 666 aaPredicted RBP12.56□□□□□ -0.4
PRKCB-207ENST00000486868 TLK2Q86UE8 772 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 CEP112Q8N8E3 955 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 TAS1R2Q8TE23 839 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 TRAPPC12Q8WVT3 735 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 ZNF516Q92618 1163 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 SEMA4DQ92854 862 aa12.56□□□□□ -0.4
PRKCB-207ENST00000486868 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.56□□□□□ -0.4
PRKCB-207ENST00000486868 EFCAB8A8MWE9 144 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 INO80B-WBP1J3KQ70 363 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 DDX3XO00571 662 aaKnown RBP eCLIP12.55□□□□□ -0.4
PRKCB-207ENST00000486868 ADCY6O43306 1168 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 ABL1P00519 1130 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 RPLP2P05387 115 aaKnown RBP12.55□□□□□ -0.4
PRKCB-207ENST00000486868 H2AFZP0C0S5 128 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 ZNF286BP0CG31 522 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 GNAT1P11488 350 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 TNNI1P19237 187 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 CYP2B6P20813 491 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 TBXAS1P24557 533 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-207ENST00000486868 HOXC8P31273 242 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 MATR3P43243 847 aaKnown RBP eCLIP12.55□□□□□ -0.46e-6■■■■□ 20.3
PRKCB-207ENST00000486868 ACOT2P49753 483 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 ARID5AQ03989 594 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 AMHR2Q16671 573 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 H2AFVQ71UI9 128 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 TRAPPC11Q7Z392 1133 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 ZNF677Q86XU0 584 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 NT5DC4Q86YG4 428 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 ARHGEF19Q8IW93 802 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 CD302Q8IX05 232 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 KIAA0319LQ8IZA0 1049 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 NME8Q8N427 588 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 OLIG1Q8TAK6 271 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 KAT2BQ92831 832 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 NLRP4Q96MN2 994 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 KREMEN1Q96MU8 473 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 TCHPQ9BT92 498 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 INO80BQ9C086 356 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-207ENST00000486868 PDE11AQ9HCR9 933 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 ANKFY1Q9P2R3 1169 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 PCDHGC5Q9Y5F6 944 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 MCM3APO60318 1980 aa12.55□□□□□ -0.4
PRKCB-207ENST00000486868 HLA-DRAP01903 254 aa12.54□□□□□ -0.4
PRKCB-207ENST00000486868 CLTAP09496 248 aa12.54□□□□□ -0.4
PRKCB-207ENST00000486868 TNFAIP3P21580 790 aa12.54□□□□□ -0.4
PRKCB-207ENST00000486868 CYP2C19P33261 490 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms