RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 LIMCH1Q9UPQ0 1083 aa9.45□□□□□ -0.9
APTX-228ENST00000486724 TEX15Q9BXT5 2789 aa9.45□□□□□ -0.9
APTX-228ENST00000486724 EVPLQ92817 2033 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 SH2B2O14492 632 aaPredicted RBP9.44□□□□□ -0.9
APTX-228ENST00000486724 HBP1O60381 514 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 B4GALT3O60512 393 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 AKAP3O75969 853 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 HNRNPA1P09651 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
APTX-228ENST00000486724 PHKA2P46019 1235 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 EVCP57679 992 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 CUL4AQ13619 759 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 SART3Q15020 963 aaKnown RBP9.44□□□□□ -0.9
APTX-228ENST00000486724 ZNF484Q5JVG2 852 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 ZNF280BQ86YH2 543 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 HOMER1Q86YM7 354 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 ITFG1Q8TB96 612 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 URGCPQ8TCY9 931 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 BRF1Q92994 677 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 PDLIM2Q96JY6 352 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 ZC3H10Q96K80 434 aaKnown RBP9.44□□□□□ -0.9
APTX-228ENST00000486724 TMEM175Q9BSA9 504 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 TSPYL1Q9H0U9 437 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 SLC32A1Q9H598 525 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 BRD9Q9H8M2 597 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.44□□□□□ -0.9
APTX-228ENST00000486724 SLC9A2Q9UBY0 812 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 ZKSCAN5Q9Y2L8 839 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 FAN1Q9Y2M0 1017 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 PIAS3Q9Y6X2 628 aa9.44□□□□□ -0.9
APTX-228ENST00000486724 DOCK6Q96HP0 2047 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 NID2Q14112 1375 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 MAP3K13O43283 966 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 C22orf31O95567 290 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 ALDH2P05091 517 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 SKIP12755 728 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 ITGB5P18084 799 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 CDK11BP21127 795 aaKnown RBP9.43□□□□□ -0.9
APTX-228ENST00000486724 DDIT3P35638 169 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 NLRP11P59045 1033 aaKnown RBP9.43□□□□□ -0.9
APTX-228ENST00000486724 ACTR2P61160 394 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 SIM1P81133 766 aaPredicted RBP9.43□□□□□ -0.9
APTX-228ENST00000486724 DSG1Q02413 1049 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 KLHL40Q2TBA0 621 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 CCDC178Q5BJE1 867 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 LIN9Q5TKA1 542 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 LILRA6Q6PI73 481 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 IQCA1Q86XH1 822 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 ZNF710Q8N1W2 664 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 METTL13Q8N6R0 699 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 MYRIPQ8NFW9 859 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 IRF7Q92985 503 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 LPPQ93052 612 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 ELSPBP1Q96BH3 223 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 TRAIPQ9BWF2 469 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 LRRC2Q9BYS8 371 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 PLA2G2FQ9BZM2 168 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 LY9Q9HBG7 655 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 ZSWIM5Q9P217 1185 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 KCNH3Q9ULD8 1083 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 TPCN1Q9ULQ1 816 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 RAXQ9Y2V3 346 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 ACACAQ13085 2346 aa9.43□□□□□ -0.9
APTX-228ENST00000486724 COL12A1Q99715 3063 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 CCDC163A0A0D9SF12 145 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 ZBTB42B2RXF5 422 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 KLRF2D3W0D1 207 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 NRP1O14786 923 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 MAFGO15525 162 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 XYLBO75191 536 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 LARGE1O95461 756 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 CAVIN2O95810 425 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 HOXA9P31269 272 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 LIFRP42702 1097 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 CREB5Q02930 508 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 CREMQ03060 361 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 ELF2Q15723 593 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 ME3Q16798 604 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 LONRF3Q496Y0 759 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 C1orf228Q6PIY5 440 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 Q6ZS52 159 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 TAS1R1Q7RTX1 841 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 SGMS1Q86VZ5 419 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 CREBRFQ8IUR6 639 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 GLYCTKQ8IVS8 523 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 RNF168Q8IYW5 571 aaPredicted RBP9.42□□□□□ -0.9
APTX-228ENST00000486724 STAG2Q8N3U4 1231 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 SMARCC2Q8TAQ2 1214 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 IGDCC4Q8TDY8 1250 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 CUL5Q93034 780 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 ZNF274Q96GC6 653 aaPredicted RBP9.42□□□□□ -0.9
APTX-228ENST00000486724 INTS4Q96HW7 963 aaKnown RBP9.42□□□□□ -0.9
APTX-228ENST00000486724 MBOAT7Q96N66 472 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 FAM193BQ96PV7 902 aaPredicted RBP9.42□□□□□ -0.9
APTX-228ENST00000486724 UBAC1Q9BSL1 405 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 CLMPQ9H6B4 373 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 TRPV5Q9NQA5 729 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 CHST12Q9NRB3 414 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 TMEM51Q9NW97 253 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 MARCH5Q9NX47 278 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 GDE1Q9NZC3 331 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms