RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 FNBP1Q96RU3 617 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 MCOLN1Q9GZU1 580 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 LRRIQ3A6PVS8 624 aaPredicted RBP22.21■■□□□ 1.15
VCPKMT-203ENST00000484763 N4BP1O75113 896 aaKnown RBP22.21■■□□□ 1.15
VCPKMT-203ENST00000484763 ATN1P54259 1190 aaPredicted RBP22.21■■□□□ 1.15
VCPKMT-203ENST00000484763 C1orf220Q5T0J3 134 aa22.21■■□□□ 1.15
VCPKMT-203ENST00000484763 CEP120Q8N960 986 aa22.21■■□□□ 1.15
VCPKMT-203ENST00000484763 MMRN2Q9H8L6 949 aa22.21■■□□□ 1.15
VCPKMT-203ENST00000484763 ST3GAL5Q9UNP4 418 aa22.21■■□□□ 1.15
VCPKMT-203ENST00000484763 SIK3Q9Y2K2 1263 aa22.21■■□□□ 1.15
VCPKMT-203ENST00000484763 SQORQ9Y6N5 450 aa22.21■■□□□ 1.15
VCPKMT-203ENST00000484763 GTPBP10A4D1E9 387 aaKnown RBP22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 GPR182O15218 404 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 PQBP1O60828 265 aaKnown RBP22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 NPTXRO95502 500 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 DLATP10515 647 aaKnown RBP22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 MYL7Q01449 175 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 BFSP2Q13515 415 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 C1orf53Q5VUE5 145 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 ANKRD33Q7Z3H0 272 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 USP38Q8NB14 1042 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 PCMTD1Q96MG8 357 aaPredicted RBP22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 ANK1P16157 1881 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 TULP1O00294 542 aaPredicted RBP22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 CLTAP09496 248 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 STAG3L1P0CL83 205 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 OSTNP61366 133 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 POU5F1Q01860 360 aaKnown RBP22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 PPP3CAQ08209 521 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 TBX2Q13207 712 aaPredicted RBP22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 TRIM14Q14142 442 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 CBWD6Q4V339 395 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 CBWD3Q5JTY5 395 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 CBWD5Q5RIA9 395 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 PDE11AQ9HCR9 933 aa22.2■■□□□ 1.14
VCPKMT-203ENST00000484763 P4HA2O15460 535 aa22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 GHRP10912 638 aa22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 GTF2H1P32780 548 aa22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 GCLMP48507 274 aa22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 MXI1P50539 228 aa22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 GSDMDP57764 484 aa22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 CLDN10P78369 228 aa22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 NFX1Q12986 1120 aaKnown RBP22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 PAK2Q13177 524 aa22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 LPIN1Q14693 890 aa22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 SURF1Q15526 300 aa22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 GBP6Q6ZN66 633 aa22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 TRIM6Q9C030 488 aaPredicted RBP22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 RPF1Q9H9Y2 349 aaKnown RBP22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 KIAA0100Q14667 2235 aaKnown RBP22.19■■□□□ 1.14
VCPKMT-203ENST00000484763 GRM5P41594 1212 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 KLK7P49862 253 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 KCNMA1Q12791 1236 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 CETN1Q12798 172 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 ENOX2Q16206 610 aaKnown RBP22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 EXOC3L4Q17RC7 722 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 TRAF7Q6Q0C0 670 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 CCDC186Q7Z3E2 898 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 PPFIBP1Q86W92 1011 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 IQCDQ96DY2 449 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 TOX2Q96NM4 488 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 POP1Q99575 1024 aaKnown RBP22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 CGRRF1Q99675 332 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 CRACR2AQ9BSW2 395 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 NUP58Q9BVL2 599 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 EIF2AQ9BY44 585 aaKnown RBP22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 C11orf49Q9H6J7 331 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 AGO3Q9H9G7 860 aaKnown RBP22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 TMEM8AQ9HCN3 771 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 ERVK-5Q9HDB9 667 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 CHST12Q9NRB3 414 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 GCNT4Q9P109 453 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 RALGAPA2Q2PPJ7 1873 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 CITO14578 2027 aa22.18■■□□□ 1.14
VCPKMT-203ENST00000484763 PMM2O15305 246 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 IL18RAPO95256 599 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 TPM1P09493 284 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 CXCL8P10145 99 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 SELPP16109 830 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 TNNI1P19237 187 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 TRIM21P19474 475 aaKnown RBP22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 WNT7BP56706 349 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 KRT39Q6A163 491 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 TWF2Q6IBS0 349 aaKnown RBP22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 TMEM192Q8IY95 271 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 TMEM117Q9H0C3 514 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 TOPORSQ9NS56 1045 aaPredicted RBP22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 PADI3Q9ULW8 664 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 DCDC2CA8MYV0 355 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 PITPNM1O00562 1244 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 GYPCP04921 128 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 CD52P31358 61 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 TRIM60Q495X7 471 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 FIGNQ5HY92 759 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 LRRC8DQ7L1W4 858 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 PAWRQ96IZ0 340 aaKnown RBP22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 ACAP3Q96P50 834 aa22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 CCDC94Q9BW85 323 aaPredicted RBP22.17■■□□□ 1.14
VCPKMT-203ENST00000484763 TANC1Q9C0D5 1861 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms