RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 TRIM51Q9BSJ1 452 aa10.8□□□□□ -0.68
COL12A1-207ENST00000483888 PSMC3IPQ9P2W1 217 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-207ENST00000483888 KIAA1024Q9UPX6 916 aa10.8□□□□□ -0.68
COL12A1-207ENST00000483888 VIRMAQ69YN4 1812 aaKnown RBP10.8□□□□□ -0.68
COL12A1-207ENST00000483888 TSPAN4O14817 238 aa10.8□□□□□ -0.68
COL12A1-207ENST00000483888 PSMA4P25789 261 aaKnown RBP10.8□□□□□ -0.68
COL12A1-207ENST00000483888 PMLP29590 882 aa10.8□□□□□ -0.68
COL12A1-207ENST00000483888 NUDT2P50583 147 aa10.8□□□□□ -0.68
COL12A1-207ENST00000483888 KCNMA1Q12791 1236 aa10.8□□□□□ -0.68
COL12A1-207ENST00000483888 AKIRIN2Q53H80 203 aa10.8□□□□□ -0.68
COL12A1-207ENST00000483888 DDIASQ8IXT1 998 aa10.8□□□□□ -0.68
COL12A1-207ENST00000483888 ENKURQ8TC29 256 aa10.8□□□□□ -0.68
COL12A1-207ENST00000483888 APOL4Q9BPW4 351 aa10.8□□□□□ -0.68
COL12A1-207ENST00000483888 ROPN1BQ9BZX4 212 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-207ENST00000483888 ROPN1Q9HAT0 212 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-207ENST00000483888 RPRD1BQ9NQG5 326 aaKnown RBP10.8□□□□□ -0.68
COL12A1-207ENST00000483888 S100A6P06703 90 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 KRT20P35900 424 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 EIF6P56537 245 aaKnown RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 DMP1Q13316 513 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 AKAP14Q86UN6 197 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 AGAP11Q8TF27 550 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 EPAS1Q99814 870 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 TMBIM4Q9HC24 238 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 ZNF532Q9HCE3 1301 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 MYH9P35579 1960 aaKnown RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 CLIC2O15247 247 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 CNOT3O75175 753 aaKnown RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 LIG4P49917 911 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 ARPP19P56211 112 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 ADAM17P78536 824 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 FAM45BPQ6NSW5 357 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 FANCBQ8NB91 859 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 SMARCAL1Q9NZC9 954 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 L1RE1Q9UN81 338 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 NPC1L1Q9UHC9 1359 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 MED26O95402 600 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 PTPN4P29074 926 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 PPARGP37231 505 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 CYP4A11Q02928 519 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 IMPG1Q17R60 797 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 CYP4A22Q5TCH4 519 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 EFHD2Q96C19 240 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 EDC3Q96F86 508 aaKnown RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 ADAM33Q9BZ11 813 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 TIMMDC1Q9NPL8 285 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 CLIC5Q9NZA1 410 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 PAMP19021 973 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 AASDHQ4L235 1098 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 PPP1R2P3Q6NXS1 205 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 CHP1Q99653 195 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 ENTPD7Q9NQZ7 604 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 TRNAU1APQ9NX07 287 aaKnown RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 TUFMP49411 452 aaKnown RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 SCNN1BP51168 640 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 POLGP54098 1239 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 NCKAP1LP55160 1127 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 SCRN3Q0VDG4 424 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 NEDD8Q15843 81 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 BARGINQ6ZT62 677 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 ANKMY2Q8IV38 441 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 PLEKHG4BQ96PX9 1271 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 GCOM2Q9BZD3 368 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 ISCUQ9H1K1 167 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 ZNF556Q9HAH1 456 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 MRPL39Q9NYK5 338 aaKnown RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 ZNF212Q9UDV6 495 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 ABCC4O15439 1325 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 TRIM64CA6NLI5 447 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 IMPDH2P12268 514 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 MEI1Q5TIA1 1274 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 GET4Q7L5D6 327 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 RIBC1Q8N443 379 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 SNX19Q92543 992 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 GPKOWQ92917 476 aaPredicted RBP eCLIP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 V9GYQ6 96 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 FOXP2O15409 715 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 TRIQKQ629K1 86 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 PCYOX1LQ8NBM8 494 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 C1orf54Q8WWF1 131 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 NACA2Q9H009 215 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 CDYLQ9Y232 598 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 TRIM49BA6NDI0 452 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 IFNA8P32881 189 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 SERPINH1P50454 418 aaKnown RBP10.79□□□□□ -0.68
COL12A1-207ENST00000483888 DDR1Q08345 913 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 FGD2Q7Z6J4 655 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 TINF2Q9BSI4 451 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 MED10Q9BTT4 135 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 NUP85Q9BW27 656 aa10.79□□□□□ -0.68
COL12A1-207ENST00000483888 MMP1P03956 469 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 SRGAP2CP0DJJ0 459 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 GPC5P78333 572 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 SLC29A2Q14542 456 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 PPP6R3Q5H9R7 873 aaPredicted RBP10.78□□□□□ -0.68
COL12A1-207ENST00000483888 PASD1Q8IV76 773 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 PDCD6IPQ8WUM4 868 aaKnown RBP10.78□□□□□ -0.68
COL12A1-207ENST00000483888 RBM41Q96IZ5 413 aaKnown RBP10.78□□□□□ -0.68
COL12A1-207ENST00000483888 ZSCAN10Q96SZ4 725 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms