RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 GRAMD1CQ8IYS0 662 aa14.67□□□□□ -0.06
SSR1-208ENST00000483409 BCL7CQ8WUZ0 217 aaPredicted RBP14.67□□□□□ -0.06
SSR1-208ENST00000483409 MRPS27Q92552 414 aaKnown RBP14.67□□□□□ -0.06
SSR1-208ENST00000483409 KCNN1Q92952 543 aa14.67□□□□□ -0.06
SSR1-208ENST00000483409 TMEM169Q96HH4 297 aa14.67□□□□□ -0.06
SSR1-208ENST00000483409 PYM1Q9BRP8 204 aaKnown RBP14.67□□□□□ -0.06
SSR1-208ENST00000483409 FGFBP2Q9BYJ0 223 aa14.67□□□□□ -0.06
SSR1-208ENST00000483409 TRIM9Q9C026 710 aa14.67□□□□□ -0.06
SSR1-208ENST00000483409 LRRC27Q9C0I9 530 aa14.67□□□□□ -0.06
SSR1-208ENST00000483409 NSUN3Q9H649 340 aaKnown RBP14.67□□□□□ -0.06
SSR1-208ENST00000483409 MAGEF1Q9HAY2 307 aa14.67□□□□□ -0.06
SSR1-208ENST00000483409 TLR9Q9NR96 1032 aa14.67□□□□□ -0.06
SSR1-208ENST00000483409 SERTAD1Q9UHV2 236 aa14.67□□□□□ -0.06
SSR1-208ENST00000483409 PRG3Q9Y2Y8 225 aaPredicted RBP14.67□□□□□ -0.06
SSR1-208ENST00000483409 UNC80Q8N2C7 3258 aa14.67□□□□□ -0.06
SSR1-208ENST00000483409 ANK1P16157 1881 aa14.67□□□□□ -0.06
SSR1-208ENST00000483409 PTGESO14684 152 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 CLDN3O15551 220 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 ACTN4O43707 911 aaKnown RBP14.66□□□□□ -0.06
SSR1-208ENST00000483409 GCNT3O95395 438 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 SCP2P22307 547 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 OR1G1P47890 313 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 CASP5P51878 434 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 ERVFC1P60507 584 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 KRT17Q04695 432 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 DSC1Q08554 894 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 SEZ6Q53EL9 994 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 GLRA4Q5JXX5 417 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 ZNF720Q7Z2F6 126 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 MAP4K3Q8IVH8 894 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 COLGALT2Q8IYK4 626 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 CEP57L1Q8IYX8 460 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 FSIP1Q8NA03 581 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 SLC17A8Q8NDX2 589 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 MICAL1Q8TDZ2 1067 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 IGSF21Q96ID5 467 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 TMEM175Q9BSA9 504 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 CCDC94Q9BW85 323 aaPredicted RBP14.66□□□□□ -0.06
SSR1-208ENST00000483409 HAPLN2Q9GZV7 340 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 BLZF1Q9H2G9 400 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 ST6GALNAC4Q9H4F1 302 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 ENTPD7Q9NQZ7 604 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 CACNG4Q9UBN1 327 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 PUF60Q9UHX1 559 aaKnown RBP14.66□□□□□ -0.06
SSR1-208ENST00000483409 LZTS1Q9Y250 596 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 FAN1Q9Y2M0 1017 aa14.66□□□□□ -0.06
SSR1-208ENST00000483409 NRP1O14786 923 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 PPP1R37O75864 691 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 PIGRP01833 764 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 ALDH2P05091 517 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 SLFN14P0C7P3 912 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 MYBP10242 640 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 ABCD1P33897 745 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 SYKP43405 635 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 NDUFA8P51970 172 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 YARSP54577 528 aaKnown RBP14.65□□□□□ -0.06
SSR1-208ENST00000483409 MCL1Q07820 350 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 PLPP4Q5VZY2 271 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 SLC39A4Q6P5W5 647 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 ADGRD2Q7Z7M1 963 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 RABGGTAQ92696 567 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 HPS3Q969F9 1004 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 C7orf25Q9BPX7 421 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 TCF25Q9BQ70 676 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 IKZF4Q9H2S9 585 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 GOLPH3LQ9H4A5 285 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 OLFML3Q9NRN5 406 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 CIZ1Q9ULV3 898 aaPredicted RBP14.65□□□□□ -0.06
SSR1-208ENST00000483409 HPSEQ9Y251 543 aa14.65□□□□□ -0.06
SSR1-208ENST00000483409 SPTBN5Q9NRC6 3674 aaKnown RBP14.64□□□□□ -0.07
SSR1-208ENST00000483409 TCF20Q9UGU0 1960 aaKnown RBP14.64□□□□□ -0.07
SSR1-208ENST00000483409 A0A1W2PQ27 194 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 A0A1W2PQ64 194 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 A0A1W2PQD8 194 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 CARNS1A5YM72 827 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 CASTOR2A6NHX0 329 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 TISP43B9A030 160 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 ANKRD63C9JTQ0 380 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 F8W810 466 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 FSCN2O14926 492 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 THP07101 528 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 GTF2F1P35269 517 aaKnown RBP eCLIP14.64□□□□□ -0.07
SSR1-208ENST00000483409 KCNA1Q09470 495 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 CUL4BQ13620 913 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.64□□□□□ -0.07
SSR1-208ENST00000483409 HVCN1Q96D96 273 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 PAGE5Q96GU1 130 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 SNX27Q96L92 541 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 ACAP3Q96P50 834 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 STRA6Q9BX79 667 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 VN1R3Q9BXE9 311 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 IGFLR1Q9H665 355 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 TOPORSQ9NS56 1045 aaPredicted RBP14.64□□□□□ -0.07
SSR1-208ENST00000483409 MARCH5Q9NX47 278 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 THEGQ9P2T0 379 aa14.64□□□□□ -0.07
SSR1-208ENST00000483409 XIRP2A4UGR9 3374 aa14.63□□□□□ -0.07
SSR1-208ENST00000483409 FAM237AA0A1B0GTK4 181 aa14.63□□□□□ -0.07
SSR1-208ENST00000483409 MEFVO15553 781 aaPredicted RBP14.63□□□□□ -0.07
SSR1-208ENST00000483409 NR1I2O75469 434 aa14.63□□□□□ -0.07
SSR1-208ENST00000483409 PRPF6O94906 941 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms