RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 TDP1Q9NUW8 608 aa7.38□□□□□ -1.23
PMS1-219ENST00000483293 ST6GALNAC2Q9UJ37 374 aa7.38□□□□□ -1.23
PMS1-219ENST00000483293 SH3BP1Q9Y3L3 701 aa7.38□□□□□ -1.23
PMS1-219ENST00000483293 MYBBP1AQ9BQG0 1328 aaKnown RBP7.37□□□□□ -1.23
PMS1-219ENST00000483293 OFD1O75665 1012 aa7.37□□□□□ -1.23
PMS1-219ENST00000483293 GASTP01350 101 aa7.37□□□□□ -1.23
PMS1-219ENST00000483293 AMY1AP04745 511 aa7.37□□□□□ -1.23
PMS1-219ENST00000483293 ATF3P18847 181 aa7.37□□□□□ -1.23
PMS1-219ENST00000483293 WASP42768 502 aa7.37□□□□□ -1.23
PMS1-219ENST00000483293 TARDBPQ13148 414 aaKnown RBP eCLIP7.37□□□□□ -1.23
PMS1-219ENST00000483293 MRPL49Q13405 166 aaKnown RBP7.37□□□□□ -1.23
PMS1-219ENST00000483293 PDZD4Q76G19 769 aaPredicted RBP7.37□□□□□ -1.23
PMS1-219ENST00000483293 EPM2AIP1Q7L775 607 aaPredicted RBP7.37□□□□□ -1.23
PMS1-219ENST00000483293 SGMS1Q86VZ5 419 aa7.37□□□□□ -1.23
PMS1-219ENST00000483293 DRC7Q8IY82 874 aa7.37□□□□□ -1.23
PMS1-219ENST00000483293 SSBP3Q9BWW4 388 aaPredicted RBP7.37□□□□□ -1.23
PMS1-219ENST00000483293 MANSC1Q9H8J5 431 aa7.37□□□□□ -1.23
PMS1-219ENST00000483293 LANCL2Q9NS86 450 aa7.37□□□□□ -1.23
PMS1-219ENST00000483293 PMS2P1A4D2B8 440 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 HSPA6P17066 643 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 LPOP22079 712 aaPredicted RBP7.36□□□□□ -1.23
PMS1-219ENST00000483293 AKAP5P24588 427 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 PCSK1P29120 753 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 RAP2BP61225 183 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 ICAM4Q14773 271 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 ELAVL1Q15717 326 aaKnown RBP7.36□□□□□ -1.23
PMS1-219ENST00000483293 SLC35B2Q8TB61 432 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 CAMKK2Q96RR4 588 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 RBM15Q96T37 977 aaKnown RBP eCLIP7.36□□□□□ -1.23
PMS1-219ENST00000483293 MAP3K14Q99558 947 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 NUP88Q99567 741 aaPredicted RBP7.36□□□□□ -1.23
PMS1-219ENST00000483293 MYOCQ99972 504 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 VRK1Q99986 396 aaPredicted RBP7.36□□□□□ -1.23
PMS1-219ENST00000483293 CPPED1Q9BRF8 314 aaPredicted RBP7.36□□□□□ -1.23
PMS1-219ENST00000483293 SPON1Q9HCB6 807 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 TMEM140Q9NV12 185 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 RTEL1Q9NZ71 1219 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 HDAC5Q9UQL6 1122 aa7.36□□□□□ -1.23
PMS1-219ENST00000483293 ZNF623O75123 536 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 GPR32O75388 356 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 RAD17O75943 681 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 ITGB3P05106 788 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 HK1P19367 917 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 DDCP20711 480 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 DSC2Q02487 901 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 PGS1Q32NB8 556 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 ARHGAP29Q52LW3 1261 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 CCDC157Q569K6 752 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 AFMIDQ63HM1 303 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 ZNF585AQ6P3V2 769 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 PRR18Q8N4B5 295 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 CAMKK1Q8N5S9 505 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 Q8TCH9 128 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 HPS3Q969F9 1004 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 PGBD4Q96DM1 585 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 MVB12AQ96EY5 273 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 DEF6Q9H4E7 631 aa7.35□□□□□ -1.23
PMS1-219ENST00000483293 GNAT2P19087 354 aa7.34□□□□□ -1.23
PMS1-219ENST00000483293 ALDH1A3P47895 512 aa7.34□□□□□ -1.23
PMS1-219ENST00000483293 ZNF280AP59817 542 aaPredicted RBP7.34□□□□□ -1.23
PMS1-219ENST00000483293 KHDC1Q4VXA5 237 aaKnown RBP7.34□□□□□ -1.23
PMS1-219ENST00000483293 PPP4R3AQ6IN85 833 aa7.34□□□□□ -1.23
PMS1-219ENST00000483293 TCEAL8Q8IYN2 117 aa7.34□□□□□ -1.23
PMS1-219ENST00000483293 ZNF808Q8N4W9 903 aaPredicted RBP7.34□□□□□ -1.23
PMS1-219ENST00000483293 MAGEB6Q8N7X4 407 aa7.34□□□□□ -1.23
PMS1-219ENST00000483293 TTC8Q8TAM2 541 aa7.34□□□□□ -1.23
PMS1-219ENST00000483293 PPP1R35Q8TAP8 253 aa7.34□□□□□ -1.23
PMS1-219ENST00000483293 RELTQ969Z4 430 aa7.34□□□□□ -1.23
PMS1-219ENST00000483293 NMRK2Q9NPI5 230 aa7.34□□□□□ -1.23
PMS1-219ENST00000483293 PCDHA3Q9Y5H8 950 aa7.34□□□□□ -1.23
PMS1-219ENST00000483293 CAPN14A8MX76 684 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 DTNBO60941 627 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 IL2RBP14784 551 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 ALOX15P16050 662 aaPredicted RBP7.33□□□□□ -1.24
PMS1-219ENST00000483293 ACO1P21399 889 aaKnown RBP7.33□□□□□ -1.24
PMS1-219ENST00000483293 CDC42EP1Q00587 391 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 GTF2H3Q13889 308 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 MINDY4Q4G0A6 757 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 FAM47AQ5JRC9 791 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 CXorf57Q6NSI4 855 aaKnown RBP7.33□□□□□ -1.24
PMS1-219ENST00000483293 GADL1Q6ZQY3 521 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 ZNF572Q7Z3I7 529 aaPredicted RBP7.33□□□□□ -1.24
PMS1-219ENST00000483293 TTC7BQ86TV6 843 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 SH2D3CQ8N5H7 860 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 RNF169Q8NCN4 708 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 CHST13Q8NET6 341 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 SLC35G2Q8TBE7 412 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 PHACTR3Q96KR7 559 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 ACO2Q99798 780 aaKnown RBP7.33□□□□□ -1.24
PMS1-219ENST00000483293 MRI1Q9BV20 369 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 LSM14BQ9BX40 385 aaKnown RBP7.33□□□□□ -1.24
PMS1-219ENST00000483293 KCNH6Q9H252 994 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 SLC12A5Q9H2X9 1139 aa7.33□□□□□ -1.24
PMS1-219ENST00000483293 HECAQ9UBI9 543 aaPredicted RBP7.33□□□□□ -1.24
PMS1-219ENST00000483293 TCRBV7S2A1N4TA0A589 114 aa7.32□□□□□ -1.24
PMS1-219ENST00000483293 VSTM5A8MXK1 200 aa7.32□□□□□ -1.24
PMS1-219ENST00000483293 CXorf49A8MYA2 514 aaPredicted RBP7.32□□□□□ -1.24
PMS1-219ENST00000483293 PATE3B3GLJ2 98 aa7.32□□□□□ -1.24
PMS1-219ENST00000483293 K7ESM1 405 aa7.32□□□□□ -1.24
PMS1-219ENST00000483293 FOXD2O60548 495 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms