RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 MOGSQ13724 837 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 FOXB2Q5VYV0 432 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 SLC13A5Q86YT5 568 aaPredicted RBP11.79□□□□□ -0.52
RPGR-208ENST00000482855 GBP5Q96PP8 586 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 SLC4A9Q96Q91 983 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 SYT11Q9BT88 431 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 UBA5Q9GZZ9 404 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 DNAJC17Q9NVM6 304 aaKnown RBP11.79□□□□□ -0.52
RPGR-208ENST00000482855 ASIC3Q9UHC3 531 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 NAALADL1Q9UQQ1 740 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 PCDHB13Q9Y5F0 798 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 ACTL7BQ9Y614 415 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 A0A1W2PRG0 241 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 SIGLEC16A6NMB1 481 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 PYGMP11217 842 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 RBM5P52756 815 aaKnown RBP eCLIP11.79□□□□□ -0.52
RPGR-208ENST00000482855 OCRLQ01968 901 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 KRT17Q04695 432 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 RCN1Q15293 331 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 KHDC1Q4VXA5 237 aaKnown RBP11.79□□□□□ -0.52
RPGR-208ENST00000482855 BICDL1Q6ZP65 573 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 SESTD1Q86VW0 696 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 SCG3Q8WXD2 468 aaKnown RBP11.79□□□□□ -0.52
RPGR-208ENST00000482855 POP1Q99575 1024 aaKnown RBP11.79□□□□□ -0.52
RPGR-208ENST00000482855 TIPINQ9BVW5 301 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 FAM192AQ9GZU8 254 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 TYW1Q9NV66 732 aaKnown RBP11.79□□□□□ -0.52
RPGR-208ENST00000482855 MAST2Q6P0Q8 1798 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 COL4A1P02462 1669 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 MAGEA13PA6NCF6 341 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 RASA4BC9J798 803 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 RASA4O43374 803 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 ITIH2P19823 946 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 COMTP21964 271 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 HOXD13P35453 343 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 WDR4P57081 412 aaKnown RBP11.78□□□□□ -0.52
RPGR-208ENST00000482855 CDR2Q01850 454 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 PARP10Q53GL7 1025 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 ARSHQ5FYA8 562 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 C4orf50Q6ZRC1 276 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 RNF207Q6ZRF8 634 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 SFR1Q86XK3 245 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 PALB2Q86YC2 1186 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 DZIP1Q86YF9 867 aaKnown RBP11.78□□□□□ -0.52
RPGR-208ENST00000482855 CCDC77Q9BR77 488 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 DHX36Q9H2U1 1008 aaKnown RBP11.78□□□□□ -0.52
RPGR-208ENST00000482855 DMAP1Q9NPF5 467 aaPredicted RBP11.78□□□□□ -0.52
RPGR-208ENST00000482855 CLIC2O15247 247 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 MAGEB2O15479 319 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 HNRNPCL1O60812 293 aaKnown RBP11.78□□□□□ -0.52
RPGR-208ENST00000482855 PTGER2P43116 358 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 SERPINB4P48594 390 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 MESDQ14696 234 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 SPDYAQ5MJ70 313 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 PPFIBP2Q8ND30 876 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 WNT8AQ9H1J5 351 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 TLE6Q9H808 572 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 CHCHD3Q9NX63 227 aaKnown RBP11.78□□□□□ -0.52
RPGR-208ENST00000482855 PDP2Q9P2J9 529 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 NIP7Q9Y221 180 aaKnown RBP eCLIP11.78□□□□□ -0.52
RPGR-208ENST00000482855 SMAPO00193 183 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 TULP1O00294 542 aaPredicted RBP11.78□□□□□ -0.52
RPGR-208ENST00000482855 CREB3O43889 395 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 TJP3O95049 919 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 CETPP11597 493 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 SLC12A3P55017 1021 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 TAF1BQ53T94 588 aaPredicted RBP11.78□□□□□ -0.52
RPGR-208ENST00000482855 RHBDF2Q6PJF5 856 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 LRRC74BQ6ZQY2 392 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 FBXO33Q7Z6M2 555 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 SDCCAG8Q86SQ7 713 aaPredicted RBP11.78□□□□□ -0.52
RPGR-208ENST00000482855 C12orf50Q8NA57 414 aaPredicted RBP11.78□□□□□ -0.52
RPGR-208ENST00000482855 BORCS6Q96GS4 357 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 SNF8Q96H20 258 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 UIMC1Q96RL1 719 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 SLCO1B3Q9NPD5 702 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 NINJ2Q9NZG7 142 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 LMCD1Q9NZU5 365 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 ZFP69BQ9UJL9 534 aa11.78□□□□□ -0.52
RPGR-208ENST00000482855 ASTN1O14525 1302 aa11.77□□□□□ -0.52
RPGR-208ENST00000482855 LAMB2P55268 1798 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 TP73O15350 636 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 ASMTLO95671 621 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 GIT2Q14161 759 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 SPARCL1Q14515 664 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 R3HDM1Q15032 1099 aaKnown RBP11.77□□□□□ -0.53
RPGR-208ENST00000482855 TMED2Q15363 201 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 SIX1Q15475 284 aaPredicted RBP11.77□□□□□ -0.53
RPGR-208ENST00000482855 UBE2SQ16763 222 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 RFWD3Q6PCD5 774 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 SPOCK2Q92563 424 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 VCX3BQ9H321 246 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 RIOX1Q9H6W3 641 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 LRRC19Q9H756 370 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 DNAJC18Q9H819 358 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 ZNF287Q9HBT7 754 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 VCX3AQ9NNX9 186 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 LNPEPQ9UIQ6 1025 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 C10orf71Q711Q0 1435 aa11.77□□□□□ -0.53
RPGR-208ENST00000482855 TAF1P21675 1872 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms