RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 ZC3H3Q8IXZ2 948 aaKnown RBP16.72■□□□□ 0.27
CCM2-215ENST00000482714 CEP63Q96MT8 703 aa16.72■□□□□ 0.27
CCM2-215ENST00000482714 CBWD1Q9BRT8 395 aa16.72■□□□□ 0.27
CCM2-215ENST00000482714 FUCA2Q9BTY2 467 aa16.72■□□□□ 0.27
CCM2-215ENST00000482714 MKNK1Q9BUB5 465 aa16.72■□□□□ 0.27
CCM2-215ENST00000482714 HAPLN2Q9GZV7 340 aa16.72■□□□□ 0.27
CCM2-215ENST00000482714 CPSF3Q9UKF6 684 aaKnown RBP16.72■□□□□ 0.27
CCM2-215ENST00000482714 SYCE3A1L190 88 aa16.71■□□□□ 0.27
CCM2-215ENST00000482714 CLIC2O15247 247 aa16.71■□□□□ 0.27
CCM2-215ENST00000482714 MCCD1P59942 119 aaPredicted RBP16.71■□□□□ 0.27
CCM2-215ENST00000482714 XKR4Q5GH76 650 aa16.71■□□□□ 0.27
CCM2-215ENST00000482714 KLHL10Q6JEL2 608 aa16.71■□□□□ 0.27
CCM2-215ENST00000482714 TTI2Q6NXR4 508 aa16.71■□□□□ 0.27
CCM2-215ENST00000482714 ALKAL1Q6UXT8 129 aa16.71■□□□□ 0.27
CCM2-215ENST00000482714 FILIP1Q7Z7B0 1213 aa16.71■□□□□ 0.27
CCM2-215ENST00000482714 NT5DC4Q86YG4 428 aa16.71■□□□□ 0.27
CCM2-215ENST00000482714 THNSL1Q8IYQ7 743 aa16.71■□□□□ 0.27
CCM2-215ENST00000482714 ENOX1Q8TC92 643 aaKnown RBP16.71■□□□□ 0.27
CCM2-215ENST00000482714 ASB7Q9H672 318 aa16.71■□□□□ 0.27
CCM2-215ENST00000482714 RPF1Q9H9Y2 349 aaKnown RBP16.71■□□□□ 0.27
CCM2-215ENST00000482714 SNTG2Q9NY99 539 aa16.71■□□□□ 0.27
CCM2-215ENST00000482714 FRMD4BQ9Y2L6 1034 aa16.71■□□□□ 0.27
CCM2-215ENST00000482714 CARNS1A5YM72 827 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 EXOC3O60645 756 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 DGKIO75912 1065 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 GJB5O95377 273 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 GNA14O95837 355 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 ATF7P17544 494 aaPredicted RBP16.7■□□□□ 0.26
CCM2-215ENST00000482714 NR2F2P24468 414 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 GLB1LQ6UWU2 654 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 CRELD2Q6UXH1 353 aaPredicted RBP16.7■□□□□ 0.26
CCM2-215ENST00000482714 AGMOQ6ZNB7 445 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 USP37Q86T82 979 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 RNPC3Q96LT9 517 aaKnown RBP16.7■□□□□ 0.26
CCM2-215ENST00000482714 BPIFA3Q9BQP9 254 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 TMEM117Q9H0C3 514 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 IKZF4Q9H2S9 585 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 PRO3102Q9H379 93 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 PCIF1Q9H4Z3 704 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 RSAD1Q9HA92 442 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 CXXC1Q9P0U4 656 aaPredicted RBP16.7■□□□□ 0.26
CCM2-215ENST00000482714 PARP2Q9UGN5 583 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 INSL6Q9Y581 213 aa16.7■□□□□ 0.26
CCM2-215ENST00000482714 MICAL3Q7RTP6 2002 aa16.69■□□□□ 0.26
CCM2-215ENST00000482714 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.69■□□□□ 0.26
CCM2-215ENST00000482714 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.69■□□□□ 0.26
CCM2-215ENST00000482714 TISP43B9A030 160 aa16.69■□□□□ 0.26
CCM2-215ENST00000482714 OFD1O75665 1012 aa16.69■□□□□ 0.26
CCM2-215ENST00000482714 IL18RAPO95256 599 aa16.69■□□□□ 0.26
CCM2-215ENST00000482714 PRKCSHP14314 528 aaPredicted RBP16.69■□□□□ 0.26
CCM2-215ENST00000482714 ATP2A2P16615 1042 aaKnown RBP16.69■□□□□ 0.26
CCM2-215ENST00000482714 PSMC2P35998 433 aaKnown RBP16.69■□□□□ 0.26
CCM2-215ENST00000482714 HTRA4P83105 476 aaPredicted RBP16.69■□□□□ 0.26
CCM2-215ENST00000482714 C9orf50Q5SZB4 431 aa16.69■□□□□ 0.26
CCM2-215ENST00000482714 HERC6Q8IVU3 1022 aa16.69■□□□□ 0.26
CCM2-215ENST00000482714 TDHQ8IZJ6 230 aa16.69■□□□□ 0.26
CCM2-215ENST00000482714 ABI1Q8IZP0 508 aa16.69■□□□□ 0.26
CCM2-215ENST00000482714 NOC3LQ8WTT2 800 aaKnown RBP16.69■□□□□ 0.26
CCM2-215ENST00000482714 MFSD14AQ96MC6 490 aa16.69■□□□□ 0.26
CCM2-215ENST00000482714 RAD9AQ99638 391 aa16.69■□□□□ 0.26
CCM2-215ENST00000482714 FAM213AQ9BRX8 229 aa16.69■□□□□ 0.26
CCM2-215ENST00000482714 NXF3Q9H4D5 531 aaKnown RBP16.69■□□□□ 0.26
CCM2-215ENST00000482714 TTC26A0AVF1 554 aa16.68■□□□□ 0.26
CCM2-215ENST00000482714 HARSP12081 509 aaKnown RBP16.68■□□□□ 0.26
CCM2-215ENST00000482714 KCNE1P15382 129 aa16.68■□□□□ 0.26
CCM2-215ENST00000482714 ACOT2P49753 483 aa16.68■□□□□ 0.26
CCM2-215ENST00000482714 PMS1P54277 932 aaKnown RBP16.68■□□□□ 0.26
CCM2-215ENST00000482714 DEFB103AP81534 67 aa16.68■□□□□ 0.26
CCM2-215ENST00000482714 SNRNP35Q16560 246 aaKnown RBP16.68■□□□□ 0.26
CCM2-215ENST00000482714 SLC10A6Q3KNW5 377 aa16.68■□□□□ 0.26
CCM2-215ENST00000482714 SPATA1Q5VX52 437 aa16.68■□□□□ 0.26
CCM2-215ENST00000482714 BRSK2Q8IWQ3 736 aa16.68■□□□□ 0.26
CCM2-215ENST00000482714 CSGALNACT2Q8N6G5 542 aa16.68■□□□□ 0.26
CCM2-215ENST00000482714 CEP120Q8N960 986 aa16.68■□□□□ 0.26
CCM2-215ENST00000482714 ZNF689Q96CS4 500 aaPredicted RBP16.68■□□□□ 0.26
CCM2-215ENST00000482714 DUSP9Q99956 384 aaKnown RBP16.68■□□□□ 0.26
CCM2-215ENST00000482714 MRPL9Q9BYD2 267 aaKnown RBP16.68■□□□□ 0.26
CCM2-215ENST00000482714 RNF39Q9H2S5 420 aa16.68■□□□□ 0.26
CCM2-215ENST00000482714 METTL14Q9HCE5 456 aaKnown RBP16.68■□□□□ 0.26
CCM2-215ENST00000482714 DERAQ9Y315 318 aa16.68■□□□□ 0.26
CCM2-215ENST00000482714 HES2Q9Y543 173 aa16.68■□□□□ 0.26
CCM2-215ENST00000482714 SMTNL1A8MU46 457 aa16.67■□□□□ 0.26
CCM2-215ENST00000482714 SLC16A3O15427 465 aaKnown RBP16.67■□□□□ 0.26
CCM2-215ENST00000482714 RECQL4O94761 1208 aa16.67■□□□□ 0.26
CCM2-215ENST00000482714 AKAP5P24588 427 aa16.67■□□□□ 0.26
CCM2-215ENST00000482714 CYP2J2P51589 502 aa16.67■□□□□ 0.26
CCM2-215ENST00000482714 ZNF445P59923 1031 aa16.67■□□□□ 0.26
CCM2-215ENST00000482714 LRSAM1Q6UWE0 723 aa16.67■□□□□ 0.26
CCM2-215ENST00000482714 INTS8Q75QN2 995 aaKnown RBP16.67■□□□□ 0.26
CCM2-215ENST00000482714 CMTR2Q8IYT2 770 aaKnown RBP16.67■□□□□ 0.26
CCM2-215ENST00000482714 RNF169Q8NCN4 708 aa16.67■□□□□ 0.26
CCM2-215ENST00000482714 URGCPQ8TCY9 931 aa16.67■□□□□ 0.26
CCM2-215ENST00000482714 ZBED2Q9BTP6 218 aa16.67■□□□□ 0.26
CCM2-215ENST00000482714 CNTN3Q9P232 1028 aa16.67■□□□□ 0.26
CCM2-215ENST00000482714 CTNND2Q9UQB3 1225 aa16.67■□□□□ 0.26
CCM2-215ENST00000482714 COLQQ9Y215 455 aaPredicted RBP16.67■□□□□ 0.26
CCM2-215ENST00000482714 ARL5CA6NH57 179 aa16.67■□□□□ 0.26
CCM2-215ENST00000482714 IKBKBO14920 756 aa16.67■□□□□ 0.26
CCM2-215ENST00000482714 XPOTO43592 962 aaKnown RBP16.67■□□□□ 0.26
CCM2-215ENST00000482714 UPP2O95045 317 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms