RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 SLC16A4O15374 487 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 TADA2AO75478 443 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 CNPP09543 421 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 PLS3P13797 630 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 EPCAMP16422 314 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 GLUD2P49448 558 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 RAD51AP2Q09MP3 1159 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 KIAA0319Q5VV43 1072 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 KIAA1841Q6NSI8 718 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 FUT10Q6P4F1 479 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 TAS1R3Q7RTX0 852 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 TAS1R1Q7RTX1 841 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 RNF135Q8IUD6 432 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 RPGRIP1Q96KN7 1286 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 NECTIN4Q96NY8 510 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 LRFN3Q9BTN0 628 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 ADAM28Q9UKQ2 775 aa16.86■□□□□ 0.29
EXOSC3-205ENST00000482614 F8W810 466 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 C2CD2LO14523 706 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 COL9A1P20849 921 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 MTHFRP42898 656 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 CLCN4P51793 760 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 DSG1Q02413 1049 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 GRIN1Q05586 938 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 STRN3Q13033 797 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 RESTQ13127 1097 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 HSP90AA2PQ14568 343 aaPredicted RBP16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 USP41Q3LFD5 358 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 GPR65Q8IYL9 337 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 RASSF8Q8NHQ8 419 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 RIPOR3Q96MK2 946 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 CCDC94Q9BW85 323 aaPredicted RBP16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 TARS2Q9BW92 718 aaKnown RBP16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 CDT1Q9H211 546 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 RXFP1Q9HBX9 757 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 PTPRHQ9HD43 1115 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 CHST7Q9NS84 486 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 LARSQ9P2J5 1176 aaKnown RBP16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 ODF2LQ9ULJ1 636 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 CLIC4Q9Y696 253 aa16.85■□□□□ 0.29
EXOSC3-205ENST00000482614 CASTOR2A6NHX0 329 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 H0YCG3 227 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 ADH1AP07327 375 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 GRM5P41594 1212 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 YARSP54577 528 aaKnown RBP16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 PTPAQ15257 358 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 NAB2Q15742 525 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 ZNF568Q3ZCX4 644 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 ARSHQ5FYA8 562 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 HERC4Q5GLZ8 1057 aaPredicted RBP16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 RARS2Q5T160 578 aaKnown RBP16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 SNX21Q969T3 373 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 FBXL18Q96ME1 805 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 TCHPQ9BT92 498 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 GPR62Q9BZJ7 368 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 CCSER1Q9C0I3 900 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 ZSCAN16Q9H4T2 348 aaPredicted RBP16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 C11orf16Q9NQ32 467 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 BLOC1S4Q9NUP1 217 aa16.84■□□□□ 0.29
EXOSC3-205ENST00000482614 NPHP3-ACAD11A0A0J9YXS1 232 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 SPDYE4A6NLX3 237 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 SF3B1O75533 1304 aaKnown RBP eCLIP16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 MCF2P10911 925 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 PLCG1P19174 1290 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 PROZP22891 400 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 DHX8Q14562 1220 aaKnown RBP16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 KARSQ15046 597 aaKnown RBP16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 TRIP11Q15643 1979 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 ATAT1Q5SQI0 421 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 ELMSAN1Q6PJG2 1045 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 MPZL3Q6UWV2 235 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 GPBP1Q86WP2 473 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 C12orf76Q8N812 135 aaPredicted RBP16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 TMEM161BQ8NDZ6 487 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 RABGGTAQ92696 567 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 RAD54LQ92698 747 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 PAAF1Q9BRP4 392 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 CXCL16Q9H2A7 254 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 C5orf42Q9H799 3197 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 SFXN1Q9H9B4 322 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 TOPORSQ9NS56 1045 aaPredicted RBP16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 FNIP2Q9P278 1114 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 DPP7Q9UHL4 492 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 MUTYHQ9UIF7 546 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 MTMR6Q9Y217 621 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 NR2E1Q9Y466 385 aa16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 SRPRBQ9Y5M8 271 aaKnown RBP16.83■□□□□ 0.28
EXOSC3-205ENST00000482614 FAM86C2PA6NEL3 165 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 PRR33A8MZF0 331 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 TEX28O15482 410 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 STX6O43752 255 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 BRD1O95696 1058 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 C1RP00736 705 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 KRT18P05783 430 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 MAPTP10636 758 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 SCP2P22307 547 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 MARCKSP29966 332 aaPredicted RBP16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 NCKAP1LP55160 1127 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms