RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ADAM7Q9H2U9 754 aa11.53□□□□□ -0.56
CPSF4-212ENST00000482251 KMT5AQ9NQR1 393 aa11.53□□□□□ -0.56
CPSF4-212ENST00000482251 MAN1C1Q9NR34 630 aa11.53□□□□□ -0.56
CPSF4-212ENST00000482251 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
CPSF4-212ENST00000482251 DENND4AQ7Z401 1863 aa11.53□□□□□ -0.56
CPSF4-212ENST00000482251 C2orf16Q68DN1 1984 aa11.52□□□□□ -0.56
CPSF4-212ENST00000482251 NPHP3-ACAD11A0A0J9YXS1 232 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 K7ERI5 159 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 SLC16A4O15374 487 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 SPATA31D3P0C874 917 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 EFNA5P52803 228 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 GRIN1Q05586 938 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 ITIH3Q06033 890 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 TUSC3Q13454 348 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 DHX8Q14562 1220 aaKnown RBP11.52□□□□□ -0.57
CPSF4-212ENST00000482251 HSP90AA2PQ14568 343 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-212ENST00000482251 DCAF4L1Q3SXM0 396 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 PRSS55Q6UWB4 352 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-212ENST00000482251 SPATA31D4Q6ZUB0 917 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 C1orf186Q6ZWK4 172 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 TAS1R3Q7RTX0 852 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 PPFIBP1Q86W92 1011 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 RNF168Q8IYW5 571 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-212ENST00000482251 RIN2Q8WYP3 895 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-212ENST00000482251 DRC1Q96MC2 740 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 RIPOR3Q96MK2 946 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 COLEC11Q9BWP8 271 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 CDT1Q9H211 546 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 SFXN1Q9H9B4 322 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 GOLGA2P5Q9HBQ8 144 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 ADAM28Q9UKQ2 775 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 ZMYM2Q9UBW7 1377 aa11.52□□□□□ -0.57
CPSF4-212ENST00000482251 MYH11P35749 1972 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 LILRB3O75022 631 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 TADA2AO75478 443 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 GLUD1P00367 558 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 THP07101 528 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 ADH1AP07327 375 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 IGFBP6P24592 240 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-212ENST00000482251 MTHFRP42898 656 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 DSG1Q02413 1049 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 TMEM119Q4V9L6 283 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 RTP2Q5QGT7 225 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 CEP57Q86XR8 500 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 PALB2Q86YC2 1186 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 TDRD5Q8NAT2 981 aaKnown RBP11.51□□□□□ -0.57
CPSF4-212ENST00000482251 RASSF8Q8NHQ8 419 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 LRRC15Q8TF66 581 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 NECTIN4Q96NY8 510 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 TARS2Q9BW92 718 aaKnown RBP11.51□□□□□ -0.57
CPSF4-212ENST00000482251 SMOC2Q9H3U7 446 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 ARHGAP28Q9P2N2 729 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 ANKFY1Q9P2R3 1169 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 STK39Q9UEW8 545 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 NR2E1Q9Y466 385 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 SF3B1O75533 1304 aaKnown RBP eCLIP11.51□□□□□ -0.57
CPSF4-212ENST00000482251 TECTAO75443 2155 aa11.51□□□□□ -0.57
CPSF4-212ENST00000482251 TRIOO75962 3097 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 RFPL2O75678 378 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 EFEMP2O95967 443 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 ASGR2P07307 311 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 PLA2G4BP0C869 781 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 PLA2G5P39877 138 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 SLC12A3P55017 1021 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 ZXDAP98168 799 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 CUL4AQ13619 759 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 KARSQ15046 597 aaKnown RBP11.5□□□□□ -0.57
CPSF4-212ENST00000482251 SF3A1Q15459 793 aaKnown RBP11.5□□□□□ -0.57
CPSF4-212ENST00000482251 NAB2Q15742 525 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 PTPN21Q16825 1174 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 USP41Q3LFD5 358 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 ATAT1Q5SQI0 421 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 HYIQ5T013 277 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 KIAA0319Q5VV43 1072 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 ARL6IP4Q66PJ3 421 aaKnown RBP11.5□□□□□ -0.57
CPSF4-212ENST00000482251 FAM173BQ6P4H8 233 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 BRAPQ7Z569 592 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 EDAQ92838 391 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 ACO2Q99798 780 aaKnown RBP11.5□□□□□ -0.57
CPSF4-212ENST00000482251 MRPL4Q9BYD3 311 aaKnown RBP11.5□□□□□ -0.57
CPSF4-212ENST00000482251 NT5C3AQ9H0P0 336 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 TNFSF13BQ9Y275 285 aa11.5□□□□□ -0.57
CPSF4-212ENST00000482251 VWA8A3KMH1 1905 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 TRIP11Q15643 1979 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 TMEM221A6NGB7 291 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 I3L4J1 428 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 M0R296 226 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 PLS3P13797 630 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 PLCG1P19174 1290 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 GUCY2CP25092 1073 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 UBA7P41226 1012 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 CLCNKBP51801 687 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 YARSP54577 528 aaKnown RBP11.49□□□□□ -0.57
CPSF4-212ENST00000482251 CEBPZQ03701 1054 aaKnown RBP11.49□□□□□ -0.57
CPSF4-212ENST00000482251 STRN3Q13033 797 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 SEZ6Q53EL9 994 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 SPECC1Q5M775 1068 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 FAM171A1Q5VUB5 890 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 TRIM67Q6ZTA4 783 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 CCDC149Q6ZUS6 474 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms